| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5522 |
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| Symbol | |
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| ID | 7381437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 518651 |
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| End bp | 520033 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649109 |
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| Product | Signal transduction histidine kinase |
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| Protein accession | YP_002547346 |
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| Protein GI | 222106555 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACACTCA GTCAAAGACT GTTCCTGAGA ATTCTGCCGA CGCTGATCAT TACAATCGCG
CTTGTCGGCG CCTTTGCGTA TCGAAGCGCC GACCGCGAGA TTGAAAATAT CTATGATGCG
GAGTTGATCA ACGACGCCAA CACGCTTTGG GTCCTGCTCA ATCATCCGCT GGCCAAGAAT
TCGGACAAGC CGATTGTCCA GATCCCCGAT CTGGATTTCA ACATGGACGA CCAGCTGTCC
CTGAACGAAG ATGCGGATGA TTACGCCGAT GCCCACGCCT TCCGGGCCTG GAAGAATGGC
CGCCTGGTCA TGGTCAGCAG CAATTCCTTT CCTGAATCCG TCCCGGAATT CAAACGCGGC
TTTTCCAATT TCAAGCTAAA CGGTGAGACT TGGCGGGTTT ATACCCTGCC GATTCCCAAT
TCTCCTGTCA CCATTGAAGT TGCCGAGAAA ATGGCGCTGC GCGACGGGTT GGTCGCCAAT
ATTATTCTTA ATCTGTCCTT TCCATTGATG ATCCTGGTGC CGGCCATCGC CATTGTTGTG
TGGTTCGTCA TTCATAACGG CCTCAACCAT ATCCGGGTGC TTGTCCGCCA GATAAGGTCA
CGGACGCCGG ACGACCTGTC GGCAATTTCC ACCGATGGTT TGCCGCGCGA TCTTGTGCCG
CTGGTCGGCT CGCTCAATCA GTTCATGGAA AAGCTGCGTA TATCCCTGAC GCTTGAGCGC
CGCTTTGCCG ATCTCGCCGC CCATCAGTTG CGCACGCCGC AGGCTGGCAT AAAGCTGCTG
CTGCAATTGA TCGAGCGGTC GGATTCGGAG GAAGAGCGTC AGGCGCTGAT GAAGGATCTG
ACCGCCAGCA ATGAACGGGC GATGCATCTG ATTGAGCAGA TGCTCAATCT GGCCCGCGTC
AGTCACCAGC CCTTGAACCT GCAACCGACG AACCTCTTCG ATCTGGTTGC CAAGGTGCTG
GCGGATTTCG GGCCGGTCTT CAACGATAGA CGCTTGCAGG TCGAGCTTTC CGGCGATGAA
GAGGCGCTGG TGGCCACCGA CAGCACCTTG TTGCGAATGA TGATCGACAA TATCGTTGAC
AATGCCATCA AATATTCGCC GGATGCCGGT GCAATCGAGG TTAGGATCAA GGCTAAGGGC
CCCAACTGGT GCGTTTCAGT TAATGACAGC GGACCGGGCA TTCCCGTTCA GCATCGCGAC
AAGGTTTTCC AGCAATTCTA CCGGTTGCCG ACAACAGAGC GCGAGGGGAC CGGGCTTGGC
CTTGCCATTG CTGCGGCAAT TGCGGGCCGC CTTTCGGTTG ATATCGAACT GGGTGTGCCG
GACTGGGGCT ATGGCTTGCG CATGGACCTG CTTGTGCCAG CGGGGACGCT CACTGCGGCT
TGA
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| Protein sequence | MTLSQRLFLR ILPTLIITIA LVGAFAYRSA DREIENIYDA ELINDANTLW VLLNHPLAKN
SDKPIVQIPD LDFNMDDQLS LNEDADDYAD AHAFRAWKNG RLVMVSSNSF PESVPEFKRG
FSNFKLNGET WRVYTLPIPN SPVTIEVAEK MALRDGLVAN IILNLSFPLM ILVPAIAIVV
WFVIHNGLNH IRVLVRQIRS RTPDDLSAIS TDGLPRDLVP LVGSLNQFME KLRISLTLER
RFADLAAHQL RTPQAGIKLL LQLIERSDSE EERQALMKDL TASNERAMHL IEQMLNLARV
SHQPLNLQPT NLFDLVAKVL ADFGPVFNDR RLQVELSGDE EALVATDSTL LRMMIDNIVD
NAIKYSPDAG AIEVRIKAKG PNWCVSVNDS GPGIPVQHRD KVFQQFYRLP TTEREGTGLG
LAIAAAIAGR LSVDIELGVP DWGYGLRMDL LVPAGTLTAA
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