| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5448 |
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| Symbol | livF |
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| ID | 7381543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 449691 |
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| End bp | 450398 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649050 |
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| Product | ABC transporter nucleotide binding/ATPase protein (branched chain amino acid) |
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| Protein accession | YP_002547287 |
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| Protein GI | 222106496 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.359118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAG ACCTGCTCGA AATCCGAAAT GTCGTCAGCG GTTACGGCCC GACCCGCATT
ATCAATGGCA TTGACCTGAC CCTCCCCATG GGCGGTGGGC TGGCGCTGCT TGGGCGCAAT
GGCGCCGGCA AAACTACACT GCTCTGCACC ATTGCCGGGC GCTTGCTGCT CAAGGAAGGC
AGCATTCGTT TTAACTCTGG GGAAATCGGC GGGCTTTCTC CCAGCCAACG CTGCCGGCTT
GGCATAGGCT TCGTGCCGCA GGAGCGGCAG ATTTTTGCCA CGTTGAGCGT CGAGGAAAAC
CTGCGCATTG CCGATCTTCG CCGAGGATGG ACGATGGAGC GTGTCTACGA GCTCTTTCCC
CGCCTTGCCG AACGGCGGAA AAATGGTGGC AACCAGCTTT CCGGTGGAGA GCAGCAGATG
CTGGCGATAG GCCGTGCGCT GATGAGCCAG CCGACTTGCC TCCTGCTGGA TGAACCTTTT
GAGGGCTTAG CGCCGGTTAT TGTCGATATG CTGCTTGAAG CGCTGATCAA GCTTCGCAAG
GAAAGCGAAA TGTCGATGAT CATCGTTGAA CAGCATGCGA AACTGGCGCT TGAAATCGCC
GAACAGGGCA TGGTTATCGA ACGTGGCCAG GTCCGCGTCA GCGGTTCGCG TGAAAGCTTG
CTCCAGGATT GGACCGAGAT CGAGGATATG CTGGCTGTGA CGCATTAG
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| Protein sequence | MTADLLEIRN VVSGYGPTRI INGIDLTLPM GGGLALLGRN GAGKTTLLCT IAGRLLLKEG
SIRFNSGEIG GLSPSQRCRL GIGFVPQERQ IFATLSVEEN LRIADLRRGW TMERVYELFP
RLAERRKNGG NQLSGGEQQM LAIGRALMSQ PTCLLLDEPF EGLAPVIVDM LLEALIKLRK
ESEMSMIIVE QHAKLALEIA EQGMVIERGQ VRVSGSRESL LQDWTEIEDM LAVTH
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