| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5446 |
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| Symbol | |
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| ID | 7381541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 447956 |
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| End bp | 448954 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649048 |
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| Product | ABC transporter membrane spanning protein (branched chain amino acid) |
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| Protein accession | YP_002547285 |
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| Protein GI | 222106494 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.695996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATC GCTCCGCTCT TGTATCTCCA CCGTCCACGT TTACCGGCTT CTTGCGCCGC
AAGCATGGTT TTAATCCGGC TGATGGCCTG ATCGTCCTTG CGTTGGCGCT GGTGCCGCTG
CTCGGCGATG ATTATTACGC GCTCGGTTCG CAAATCCTGA TCACCATTAT CTTCGCCTTG
TCCCTCGATC TCCTGGTCGG CTATGCCGGG ATTGTCACGC TGGGCCACGC CGCCTTTTTC
GGGGTTGGTG CCTATGCCAC CGGCATTGCC TCAAAATACG GCTGGGGCGA GCCATTGAGC
GGCCTGTTGA TCGGTGCCAT GGCAGCCGGG CTGGTAGGCG CGGTGGTTGG AGCCATTGTT
CTACGCACGG CACGTTTCAC CTTGCTTATG CTGACGCTTT GCACGGTGTT TCTGTTTGGC
GAGATCGCCA ACAAGGCGAC CTGGCTGACC GGAGGCGTCG ATGGCCTGGT GGGCATGGAG
ACCTGGCCGG TTTTGGGTCT TTACGAATTC GATCTGCTCG GTCAGGTCGG TTATTGGTTC
TCGGCCCTCG TCTTTCTGCT TGTCTGGCTC GGGGTGCGCC GATTGGTCCA TTCGCCTTTT
GGACAATCGA TCATGGCGAT CCGCGACAAT CCCGGTCGCG CCGCTGCCAT CGGCATCGCG
GTCCGGCCAC GCACCTTGCT GATCTTCGTC ATTTCCTGCT TGCTGGCCGG GCTTGCCGGT
GCTCTGCAAG CCGAGGTCAA TCAGTTCGTT GGCCTGAAGG ATATGAGTTT CGAACTGTCG
GCAACTATTC TTGTCATGTT GGCGCTTGGT GGCTCAGGGC GGCTTTACGG CGCGATTATT
GGACCTGCTG TCTATCTGAT TGCCCAGGAC ATCTTGTCGA AAGACAATCC TGTCATGTGG
CAGCTCTGGC TGGGGATCAT CCTCGTGGTG CTCGTTCTTT TCGCACCAGG GGGCATTACG
CGGATTTTGG CTCAACTGCG CGGAAGGATC GGTCGATGA
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| Protein sequence | MSDRSALVSP PSTFTGFLRR KHGFNPADGL IVLALALVPL LGDDYYALGS QILITIIFAL
SLDLLVGYAG IVTLGHAAFF GVGAYATGIA SKYGWGEPLS GLLIGAMAAG LVGAVVGAIV
LRTARFTLLM LTLCTVFLFG EIANKATWLT GGVDGLVGME TWPVLGLYEF DLLGQVGYWF
SALVFLLVWL GVRRLVHSPF GQSIMAIRDN PGRAAAIGIA VRPRTLLIFV ISCLLAGLAG
ALQAEVNQFV GLKDMSFELS ATILVMLALG GSGRLYGAII GPAVYLIAQD ILSKDNPVMW
QLWLGIILVV LVLFAPGGIT RILAQLRGRI GR
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