| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5445 |
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| Symbol | livH |
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| ID | 7381540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 447089 |
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| End bp | 447946 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649047 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002547284 |
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| Protein GI | 222106493 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.596659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTGG TGGAAGTTGC GTTCCAGTCG CTTGCCTATG CAAGCGTGCT TTACCTCATA
TCCGTCGGCC TGTCGGTAAC GCTGGGTCTG ATGGGTTTCG TCAATCTGGC GCACGGCGTT
TTCGCCATGG CCGGTGGCTA TATAGCGGCC ACCGCGATCA GCGCCTGGGG CCTGCCCTGG
CCGCTCATGG TGATCTGCGC CCCCCTTGCT GTTGCGCTTC TGGCGGCGGT GGCGGAAAAG
CTGCTCTATG CCCGGCTTTA CGGTCGGTCT GAGCTGGATC AGGTTCTCTT CTGCATCGGA
TTGATCTTCA TCGTCGGTGC GCTGGCGCGG TTGTTTTTCG GGCCGTTGAT GCGCCCCGTC
GTCATTCCCG AGTTTCTGGC GCAAAATCTG ACGGTGGGTC CTTTCTCATT CTATCTCTAC
AAGCTGGTTG TGATCGGTAT CGGTATCCTG ACTGCCGCAT TCATTCTGTT TGTGCTTGAA
CGCAGCCGGA TCGGCGCCAT CATCCGGGCC TCCGTTGAAA ACCGGGGCAT GGCAGAATCG
ATTGGCATTC GCACCAAACA TGTGTTCATG GCGACCTTCG CCTTTGGGGG AGCGCTCGCG
GCCCTGGGCG GCATGCTGGG GGCGGATGTC TTCGGGCTCA ATCCGTCCTA TGCCTTCGAT
ATCCTCGTTT ATGTTCAGAT CGTCGTGGCT GTGGCGGGGC TTGGCACGTT GCGAGGCTCT
TTCGTTGCAG CCCTTCTGGT TGGCGCCGTC CAAACCGTTT CGGCCTATTA TGTGCCGGCT
TTCGGTACGG TCATGTTGTT TCTCCTCGTC TTCATCCTGC TGCTGGTCAG GCCGCGCGGG
CTGTTTGGAA GGGTATGA
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| Protein sequence | MTLVEVAFQS LAYASVLYLI SVGLSVTLGL MGFVNLAHGV FAMAGGYIAA TAISAWGLPW
PLMVICAPLA VALLAAVAEK LLYARLYGRS ELDQVLFCIG LIFIVGALAR LFFGPLMRPV
VIPEFLAQNL TVGPFSFYLY KLVVIGIGIL TAAFILFVLE RSRIGAIIRA SVENRGMAES
IGIRTKHVFM ATFAFGGALA ALGGMLGADV FGLNPSYAFD ILVYVQIVVA VAGLGTLRGS
FVAALLVGAV QTVSAYYVPA FGTVMLFLLV FILLLVRPRG LFGRV
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