| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5444 |
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| Symbol | livJ |
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| ID | 7381539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 445697 |
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| End bp | 446917 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649046 |
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| Product | ABC transporter substrate binding protein (branched amino acid) |
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| Protein accession | YP_002547283 |
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| Protein GI | 222106492 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACCG AACTGAAGTT TACACGCCGA GGTGCCCTTG GGTTGCTGGC TGCTGCGCCA
TTGGCCGGTT GGGCCGGGCA GGGACGAGCC GCCAGCCAGC CGATCAAGAT CGGGCTGGTG
CTGACCATGT CCGGCCCGTT CGCATCAAGC GGGCAAATCA TGGCCAATGC GGCGAAACTC
TACCTGGAGA CCGAGGGCAA GGCGGTGCTG GGGGATATTC CGGTCGAACT GGTCATCCGC
GACGACGGCG GTGCCAATCC GGATGTGGCC AAACGACTGG TTCAAGAACT GGTGACGCGT
GACAAGGTAC AATATCTTGG CGGCTTCCAG TGGACGCCCA ATGCCAATGC TGTGGCGCCA
TTGTTGATGA AGGCCAAGAT GCCCTGCGTC TTGTTCAATG CGGCAGGCGC CAATACCACC
CAGCTTGCGC CCTGGTATGT GCGCACGGCC TTTACCCATT GGCAGGTGAA TCAGCCGCTG
GGCGAATGGG CGGCGGCCAA GCGCGGTTTC AAGCGAGCCT ACCTGCTGAC CACGGATTTT
GCCCCTGGCC ACGATGCAGA AGAAGCGTTT ACGAAAGGCT TCACATCCAA AGGGGGAACC
ATTGTCGCCT CGGTGAAAAT GCCGATCCAG AGCACAAATT TCGTCCCCTT TCTGCTCGCA
GCCAAGCAGG AGAAGCCGGA TGTGGTCTTT GCATTCCATC CCGGCGGTGT GCAAGCCTCC
GCATTCATGC GGGCCTATCA GGAAGCGGAT TTGCGCGGTG CCGGCATCCA GTTGATTGGT
CCGGGAGACC TGACAAGCGA CGAGGAATTG CCGAATATCG GCGCAGCAGC ACTCGGCGTC
CTCACCGCTG GCCAATATAG CATGGCCGGT GATCGCCCCG CCAATGCCGC TTTTGTCGAG
GCCTGGAAAA AGGCCTATAC GTTCATGCCC GTCCGGCCCA ATTATATGGC GGTCGGTGCC
TATGATGGCA TGCATCTGAT CTGCTCGGCC ATCGCTGCGA CCAAGGGCGC TTCCGATGCC
GCCGGTGCCA TGGCCGCGAT GAAAACCTTC AAAGCGGAGC AAAGCCCGCG TGGGCCAATT
TCGATTGACC CCGAGACGCG CGACATTGTG CAGAATATCT ACATCCGTGA AGTGCGCGAG
AAGAACGGCG AGCTTGCCAA TGTGGAACTT GAAACCATTC CAGCCGTCAA AGACCCTTGG
AAGGTTGAGC ATCCTCTCTG A
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| Protein sequence | MMTELKFTRR GALGLLAAAP LAGWAGQGRA ASQPIKIGLV LTMSGPFASS GQIMANAAKL
YLETEGKAVL GDIPVELVIR DDGGANPDVA KRLVQELVTR DKVQYLGGFQ WTPNANAVAP
LLMKAKMPCV LFNAAGANTT QLAPWYVRTA FTHWQVNQPL GEWAAAKRGF KRAYLLTTDF
APGHDAEEAF TKGFTSKGGT IVASVKMPIQ STNFVPFLLA AKQEKPDVVF AFHPGGVQAS
AFMRAYQEAD LRGAGIQLIG PGDLTSDEEL PNIGAAALGV LTAGQYSMAG DRPANAAFVE
AWKKAYTFMP VRPNYMAVGA YDGMHLICSA IAATKGASDA AGAMAAMKTF KAEQSPRGPI
SIDPETRDIV QNIYIREVRE KNGELANVEL ETIPAVKDPW KVEHPL
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