| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5431 |
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| Symbol | |
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| ID | 7381527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 430113 |
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| End bp | 431513 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649034 |
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| Product | chlorohydrolase |
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| Protein accession | YP_002547271 |
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| Protein GI | 222106480 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.225763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGA CTTCGAGCGC AATGATCGTC ACCGCCGACA CTCTGTTGAC CATGGATGCG
AAAAACAGCG TCATCTCTGA TGGCGCGGTT GCTATTGAGG ACGGTCGTAT CCTGGCGGTC
GGTTCGCTGG AGGTGGTGAA GGCCAGCCAT CCGGCTCTGG CGATCAAGAG GATCGACAAT
GCCTTGCTGA TGCCGGGGCT GATCAACGCC CATGCCCATT CCGGCTTCCT GCGCGGCACA
GCGGAACATC TGCCGGTCTG GGACTGGCTG ACCATCCATA TAAACCCGAT GCACCGCGTG
CTTCTGCCGC ATGAAGCCGA GGCGGCGTCC TTTCTGTGCT ACGTCGAATC CGCACTATCC
GGCACGACGA CTGTTGTCGA TATGTGGCGC TATATGGATG GCAGTGCGCG GGCGGCACAG
TCCATCGGCA CGCGCCTGGT TGCTGTTCCG TATGTTGGTG AGCATCCCGA TTACAATTAT
TTCGAAACGC TCGACAACAA TGAGGCGATG ATTGAGACCT GGCATCGCAA GGCGGGGGGC
CGCATCAATG TCTGGGTCGG GCTGGAACAT CTGTTTTATG CCGATGCGGC TGGCCAGCAG
CGGGCCATCG CCATGGCCAA ACAGTATAAC ACCGGCTTTC ACACCCATTG TTCGGAAGCC
GAAGTCGAGG TTGGCGGCTT TATCGACACC TATGGCAAGC GCCCCATGCA TGTTCTGGAG
GATCTCGGCT TCTTCGAGGC TCCACGCACC ATGCTGGCCC ATGCCGTCTG GCTGGATGAG
GCGGAAATCG AGCTGATTGC CAGATACAAT GTCTCGGTCG CCCATAATCC GGTGTCGAAT
ATGAAGCTTG CTTCCGGCAT TGCACCGATT GCCGATATGC TGGCGGCGGG CATTCCGGTC
GGTCTTGGCA CGGATGGCGA AAAGGAAAAC AACAATTTCG ACATGTTCGA GGAGATGAAG
ACCGCCTCCC TGCTCGGCAA ACTGCGCCAC CGCGATGCCG CCGCCATGGA TAGCTGGCAA
TGTCTGCGCA TGGCGACCAT TCTCGGCGCG AGAGCTATCG GTCTTGAGGA TGAAATCGGC
TCTATCGAAG TTGGAAAGCG CGCCGATATC ATTGCGGTGC GCACCGATAC GCCGCGTATG
ACGCCACTGT TTGCCGACGG TCCCTATTTC AATGTGCAGC ACAATCTCGT CCACGCGGTG
CGCGGCGGCG ATGTCGCCAT GACCATGGTG GATGGTCAGG TGATCGTGGA AGATGGCGTG
CTGAAAACCG GCGACGTCAA GGCGATCATT GCCGATATCC ATGGCATGGC GCCTTCGCAT
TTTGCCCGCC GCGCCGCATG GCTTGCCGAA AACGGCGGCG GCACCAAGCA ATGGATCAGC
GAAGCGGAGG GTGTCAAATG A
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| Protein sequence | MSMTSSAMIV TADTLLTMDA KNSVISDGAV AIEDGRILAV GSLEVVKASH PALAIKRIDN
ALLMPGLINA HAHSGFLRGT AEHLPVWDWL TIHINPMHRV LLPHEAEAAS FLCYVESALS
GTTTVVDMWR YMDGSARAAQ SIGTRLVAVP YVGEHPDYNY FETLDNNEAM IETWHRKAGG
RINVWVGLEH LFYADAAGQQ RAIAMAKQYN TGFHTHCSEA EVEVGGFIDT YGKRPMHVLE
DLGFFEAPRT MLAHAVWLDE AEIELIARYN VSVAHNPVSN MKLASGIAPI ADMLAAGIPV
GLGTDGEKEN NNFDMFEEMK TASLLGKLRH RDAAAMDSWQ CLRMATILGA RAIGLEDEIG
SIEVGKRADI IAVRTDTPRM TPLFADGPYF NVQHNLVHAV RGGDVAMTMV DGQVIVEDGV
LKTGDVKAII ADIHGMAPSH FARRAAWLAE NGGGTKQWIS EAEGVK
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