Gene Avi_5423 details

Gene Information

• Locus tag: Avi_5423
• ID: 7381521
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 423846
• End bp: 424478
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643649029
• Product: Gst12 glutathione-S-transferase
• Protein accession: YP_002547266
• Protein GI: 222106475
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0625] Glutathione S-transferase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.355245
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGCGA TCACGCTTTA CAATTACGAT CTGGACGAGA ACTGCTACCG GGTGCGTCTG 
TTGCTGTCCT GTCTTGATGT AGCCTATGAA ACCCTCGCCA TCGACATGGT GCCGGGCCGG 
GAGGAACAGA CCCCGACGAT GCTGGCGCTC AATCCGCTCG GCGAGCTTCC GGTGCTGAAG 
GATGGCGAGC AGGTGCTTTA CGGCACGCAG GCCATTCTTG CCCATCTGGC CAGGGTCTAT 
GATCCCTCCG GCACATGGCT GCCGCTCGAT CCCGCCGTCT TTTCCGGTGT CATGCAATGG 
ACCTTGTTTT CAGCCGCGCC GCTCGGTTGT GCTGTCACGG CCCGGCGGGT GGCGCTGTTT 
GGCGGACCGG GCGATGTTGA GGTGCTGAAA GCGTCCTCGC GCGCCGCCTT CCGAATCATG 
GACGACCATA TGACGCTGCG CCAGATGGAT GGCTGCGAGT GGTTTGCCGG GGCAGGCCCG 
ACCATTGCCG ATCTCGCCCT GTTTCCAAGC TTTGCGCTCA GCCGCGACTA CGGCATCGAT 
CACGATGAAT TTCCAGCGCT TCGGCGGTGG ATAAGGCGGT TTCGCACGGT TGCTGGCTTT 
CGGACTATGC CGGGCATACC CGATTATCAC TGA 

 

Protein sequence

MSAITLYNYD LDENCYRVRL LLSCLDVAYE TLAIDMVPGR EEQTPTMLAL NPLGELPVLK 
DGEQVLYGTQ AILAHLARVY DPSGTWLPLD PAVFSGVMQW TLFSAAPLGC AVTARRVALF 
GGPGDVEVLK ASSRAAFRIM DDHMTLRQMD GCEWFAGAGP TIADLALFPS FALSRDYGID 
HDEFPALRRW IRRFRTVAGF RTMPGIPDYH