| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5418 |
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| Symbol | |
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| ID | 7381517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 418574 |
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| End bp | 419620 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649025 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002547262 |
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| Protein GI | 222106471 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0748326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGTC TTCGCCTGCA ACGCTTCCCT TCAACCACAC CTGCGGCAGC CCTGGGCGCA
CGAGTGGCGG CCATCGCGCT GGCGCTGTTG ATCGCGGGTG TCATTCTGGC TGTCGCGGGC
AAAAGCCCTG TTAACCTTGG CATTCAGGTG GTTTCGTCCT CGCTCGGCTC CAGTTTCGGT
CTGGAGGATC TTGGCCTTCT GGTCATCCCG CTGATCCTGA CCGGCCTTTC CGTCACGGTC
GCGCAACAGA TCGGTGCCTG GAATATCGGG GCGGAGGGGC AGTTTTACGC AGGTGCCTTC
GCCGCCAGCG CCGTTGGTCT TTTTGTGCCG CTGCCGGAAG GCTGGAGCCT GGTGGCGATG
TTTTTCGCCG GAGCGGTTGG CGGAAGCATC TGGATCCTCA TTCCGGCCCT TGCCCGTGCC
TATGCCAATG TTAACGAGCT GATCACCACG CTGCTGCTGA ATTTCGTCGC CATCCTGATG
GTCTATTATG TCTCCACAGA TGCCTGGCGC GAACGGGGCG GCGTCGCCAA TTCCGCCACG
CCGCGCATCA AGGCCGAAAT GCCGGAATTC TGGGGCCTCG TGCATTGGGG CCTGCCGATT
GCCGTGCTTC TCGCGCTGGC CATGGCGGCG CTGCTGGCCT TTACCCGCTG GGGTTATGAG
GTGCGGCTGA TCGGCTCCAA TCCGCACGCC GGAAACTATG CGGGCATCGC CGCCCGCCGC
CATCTGATCA CCGTCATGCT GCTATCGGGG GCCATCGCCG GTCTGGCGGG CATGTTGGAA
GTGACCGGAA CAGTGCATCG TCTCCAAGGC GGTATTTCCA ACAATTACGG CTATCTCGGT
ATCATGGTCG CCGTGCTGGC GCGGGGTTCG TGTATCGGGG TTATCCTTGC GGGTGCGCTG
ATGGCCTTCA TCCTCAATTC GGGCATCATC CTGCAAACGC AGGGGCTGAC AACCTCGACC
GTGCTGGCGA TCACCGGCCT CATCCTCTTC CTGACGGCCA TCGGCGACGA GATTTCCCAT
TACCGCATCG TGCGCGACAA GACCTGA
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| Protein sequence | MASLRLQRFP STTPAAALGA RVAAIALALL IAGVILAVAG KSPVNLGIQV VSSSLGSSFG
LEDLGLLVIP LILTGLSVTV AQQIGAWNIG AEGQFYAGAF AASAVGLFVP LPEGWSLVAM
FFAGAVGGSI WILIPALARA YANVNELITT LLLNFVAILM VYYVSTDAWR ERGGVANSAT
PRIKAEMPEF WGLVHWGLPI AVLLALAMAA LLAFTRWGYE VRLIGSNPHA GNYAGIAARR
HLITVMLLSG AIAGLAGMLE VTGTVHRLQG GISNNYGYLG IMVAVLARGS CIGVILAGAL
MAFILNSGII LQTQGLTTST VLAITGLILF LTAIGDEISH YRIVRDKT
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