| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5417 |
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| Symbol | |
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| ID | 7381516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 417627 |
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| End bp | 418562 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643649024 |
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| Product | ABC transporter membrane spanning protein (sugar/ribonucleotide) |
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| Protein accession | YP_002547261 |
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| Protein GI | 222106470 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0534576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGT TGACCGGACT TCTGACCACA GCCTTTCTGG CTGGCGGTGT CTTGGCGCTG
GCGGCCATGG GCGAAGTGCT GGCCGAGCGG GTCGGCGTCG TCAATCTCGG TGTCGAAGGG
TTGATCGCCA TGGGGGCGAT CACCGCTGTT GCCACCGTCA CCGCCTTTCC ATCGCCCATC
CTCGGCTTTT TGGCGGCGCT CGCCGTCGGC GCCTTGTTCG GCGTGGTGTT TGCGGTGGCG
ACGGTAACGA TCAGGGCCAA TCAGGTGCTT TGCGGGCTGG CATTGACCTT GATCGGCACC
GGCCTTGCCC AGACGATTGG TAAATCCTAT TCCGGCATGC CGGTCCCCGC GACATTCCAG
GGCGTCAAGA TGCCGATCCT CTCGGAGATC CCTATCCTCG GGCCGGCCTT TTTCAGCCAG
AATATTCTCG TCTACCTGAT CTACATCATC CTGCCGCTTG GCCTGTCCTT TCTGATGTTT
CGCACCCGCC ACGGGCTCAA CATGCGCGCC GTCGGCGAAA ATCCGGCGGC GGCCGATGCG
GCGGGCATTC CGGTCCATCG CATCCGCTTT GGCTATGTCT GCGCGGGCGC GGCGCTTGCC
TCAGGTGCAG GCGCCTATCT GGTTCTGGCT TTCGTGCCGT CCTGGTCGGA TGGCGTCGTG
GCCGGGCGCG GCTGGATTGC GGTGGCGCTG GTGATCTTTG CCGGATATCG GCCCATTCCA
GCCGCTCTGT CCGGCCTGCT GTTCGGCTTT ATCACCGCGC TCGGCTTCGT TGGACAGGCG
CGCGGCTGGC CGATTGCTCC GGCTTTTCTA TCCATGCTGC CCTATGCCGG AACCATCGCC
TTCATTATCG TGCCTGTGAT CGCCTGGCAG CGCATGCGCC GGTTGATGGC GGCACCCGCC
GCCCTTGGCC TGCCCTATTA CCGCAGCCTT CGTTGA
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| Protein sequence | MELLTGLLTT AFLAGGVLAL AAMGEVLAER VGVVNLGVEG LIAMGAITAV ATVTAFPSPI
LGFLAALAVG ALFGVVFAVA TVTIRANQVL CGLALTLIGT GLAQTIGKSY SGMPVPATFQ
GVKMPILSEI PILGPAFFSQ NILVYLIYII LPLGLSFLMF RTRHGLNMRA VGENPAAADA
AGIPVHRIRF GYVCAGAALA SGAGAYLVLA FVPSWSDGVV AGRGWIAVAL VIFAGYRPIP
AALSGLLFGF ITALGFVGQA RGWPIAPAFL SMLPYAGTIA FIIVPVIAWQ RMRRLMAAPA
ALGLPYYRSL R
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