| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5401 |
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| Symbol | |
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| ID | 7381504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 402081 |
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| End bp | 403181 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649012 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002547249 |
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| Protein GI | 222106458 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.459496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCC AGATCGAATT GAACGGCGTC AACAAGCATT ACGGCGCTTT CCATGCCCTG
AAGAATATCA ATCTCGCCAT CGAAAAGGGC AGTTTCGTCG CCCTGGTTGG CCCATCCGGC
TGCGGCAAGT CCACACTGTT GCGGTCGCTG GCCGGGTTGG AGAAGATTTC CGCTGGCGAA
ATGAAGATCG CTGGCAACTT GATGACCAAT GTGCCGCCCC GCAAGCGCGA CATTGCCATG
GTGTTCCAGT CCTACGCGCT CTATCCGCAT ATGACGGTTG AGGAAAATCT GACCTATAGC
CTGCGGATAA AGGGTATAGG CAAGGCGGAG GCGCGCCAGG CCGCCGAGGC AGTGGCGACA
ACAACTGGCC TGATGCCGCT GTTGAAACGC TATCCGCGTG AATTGTCCGG CGGTCAGCGC
CAGCGCGTTG CCATGAGCAG GGCGATCATC CGCAATCCCA AGGCCTTCCT GTTCGACGAG
CCGCTGTCCA ATCTCGATGC CTCCCTGCGG GTGCATATGC GAAAAGAGAT CCGGCTGCTG
CATGACCGGT TGAAGGCGAC CTCTGTCTAT GTCACCCACG ACCAAGTCGA GGCGATGACC
ATGGCCGATC ATGTCGTGGT GATGCGCGAT GGCGTCATAG AGCAGCAGGG CCGACCTCTG
GACCTTTACG ACCGGCCTGC AAACCGTTTC GTTGCCGGTT TTATCGGCTC TCCGGCGATG
AATTTCATTC CTGCGCGGGT CTCGCCGGAT GGGCTTGGTC TGGAACTTGA TTTTGTCGGG
AAGGCGGAGA TTCTGAGATT TGCCGCCGGA ATGACTGATG GCCTTGCGGC AGGCCAGCCA
CTAACCCTTG GCCTGAGGCC GGAACACCTG TCGCTGACGG CTCCCGGCGA AGGCGCGTTC
GACGTCGAGG TGGCGCTGGT CGAATCGACG GGATCGTCAA CCTATGTGAC GACCAGAACC
GAGCCGGAAT TGACCATTGT CGTTTCGGGC GGTCGCGGCC TTCGCTCCGG CGACCGGCTG
GGTGTCCGGA TCGATCCGCA GACCGTGCAT CTTTATGATG CGCAGACCGG TTTGCGGCTG
GATTTCGAGG GGATGCAATA A
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| Protein sequence | MTIQIELNGV NKHYGAFHAL KNINLAIEKG SFVALVGPSG CGKSTLLRSL AGLEKISAGE
MKIAGNLMTN VPPRKRDIAM VFQSYALYPH MTVEENLTYS LRIKGIGKAE ARQAAEAVAT
TTGLMPLLKR YPRELSGGQR QRVAMSRAII RNPKAFLFDE PLSNLDASLR VHMRKEIRLL
HDRLKATSVY VTHDQVEAMT MADHVVVMRD GVIEQQGRPL DLYDRPANRF VAGFIGSPAM
NFIPARVSPD GLGLELDFVG KAEILRFAAG MTDGLAAGQP LTLGLRPEHL SLTAPGEGAF
DVEVALVEST GSSTYVTTRT EPELTIVVSG GRGLRSGDRL GVRIDPQTVH LYDAQTGLRL
DFEGMQ
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