| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5387 |
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| Symbol | |
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| ID | 7381492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 389202 |
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| End bp | 389666 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643649000 |
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| Product | hypothetical signal peptide protein |
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| Protein accession | YP_002547237 |
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| Protein GI | 222106446 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4875] Uncharacterized protein conserved in bacteria with a cystatin-like fold |
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| TIGRFAM ID | [TIGR02246] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAAAA TTCTTTTGGC ATTCGGTGTA ACCGCCGGTC TTTCGGTATC GTCTTTTGCC
GCACCCGCGA TGGCACAGGA ATGCGCGCCA GTGACCCAGC AGCAGGTGGA AAAATTGTTT
GACCGTTGGA ATGCATCCCT TGCGACGCTC GATCCGGAGA AAGTTGTCGC GAATTATGAG
GATGATGCAG TTCTCCTCGC GACCCTGTCG AACCAGCCGC GGCTGACGCA GGAAGAGCGT
CGCGCGTATT TTGTCGATTT TCTGAAAAAG AAGCCTCAGG GCGTGGTCGA TAACCGGACG
ATCAAGCTGG GCTGCAACAC GGCCATCGAT ACCGGCGTCT ACACGTTCAC CCTGGGGGAT
GGCACAAAGG TTCCGGCCCG CTACACCTTC ACCTATGACT ATGATGGCGG GAAATGGCTG
ATTTCCTCCC ATCACTCTTC GGCAATGCCG GAACGCACGT CGTAA
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| Protein sequence | MQKILLAFGV TAGLSVSSFA APAMAQECAP VTQQQVEKLF DRWNASLATL DPEKVVANYE
DDAVLLATLS NQPRLTQEER RAYFVDFLKK KPQGVVDNRT IKLGCNTAID TGVYTFTLGD
GTKVPARYTF TYDYDGGKWL ISSHHSSAMP ERTS
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