| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5381 |
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| Symbol | |
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| ID | 7381487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 382841 |
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| End bp | 384415 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643648995 |
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| Product | ABC transporter substrate binding protein (dipeptide) |
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| Protein accession | YP_002547232 |
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| Protein GI | 222106441 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.121189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAA CACAGACTTT AAGGCACCTT GCTGTGGTTT TGGCGATGGG AACCGCCATT
GTCGCGCCAC ACGTGGCCAT GGCAAAAACC TCCACCGTGA TGAATGTAAC GCAGGTGTTT
GGCACCATCG ATCCGGCCAA GATCACCGAT TACACTCAGT ATCTGGCTGC TGTGAACCTT
TACGATGGCC TGACCACCGT GGACAGCACC GGCAAGATCA TCCCGGAACT GGCCGAGAGC
TGGGATGTGT CCAGCGATAA CCTGACCTAC ACCTTCCATC TGCGCAAGGA CGCAACATTT
CAGGATGGCT CTCCGGTTGA GGCCAAGGAT GTTGTTTATA CCGTCCAGCG CTTGCTGGCG
ATCAACAAGG GACCGGCCTA TCTGTTTGCA ACGCTGATCA ACCCCGACAA TGTGAAGGCG
GTGGATGCTC ACACCGTGAC CATCACACTC AACAAGGTCT ATGCGCCGTT CCTGACCACC
ACGCCGCTGC TGCTTGTCAT CAATGAGGAT GCCGTCAAGG CCGCTTCCAA GCAGCCCTGG
GGTGAGGATG TTGTTGGCGA AAAATCCATG GGCGCGGGCG CTTATGTGCT GTCCAGCTGG
CAGCGCGGCT CGGAAATGGT CATCAGCCGC TATGAGAAAT ATTACGCGGG CTGGCCAACA
AACCCGATTG ATGAAGTGCG CTTTGTGCAG ACCAATGACG AGGCAACCGT CAAGGCGCTG
GCGACATCTG GCCAATTGGG CATTTCCTCC ACCACCCAGG CCAACGAGAC CTATGATGCT
CTGGCCAAAA CCGACGGTTA TGTGGTCCAG ACCACACCAA CGGCCACCGG TTTTTATTTG
AAACTCAACA CCAAAGCCAC GCCGACAGAC GATGTGCATG TGCGTCGCGC CTTGCAATAT
GCCACCGATT ACAAAACCAT CCAGACACAG ATTATGACCG GTGACACGCT GGCGGGGCCG
CTGGCGCAGG TGTTCAAGGA TGCCTATCTC GATACGCTGA AAGCGCCGGA ATTTGATCTT
GAAAAGGCCA AGGCCGAGCT TGCCCAATCC AAATATGCGG GAAAGCCGAT CAAGCTGACG
CTGACCTATG TGGCAGGCCT GTCGTTTGAA GAGGATATCG CACTTCTGAT GCAATCCAAT
CTTTCGCAGA TCGGCGTGGA TGTGGACATC AAACCAGAGC CCTGGAACCG CATCACCGAA
CTGGCGGCCA AGCCGGAAAC AACGCCTGCG GCCACGCAAG TGTTCTATGG CCCAACCTAT
CCCTCGCCAG ATAGCGTGTT CTACGTGCAA TATCATTCCA AATCGGCGGG AACATGGGCC
TCCATGGAAT GGTTGCAGGA TGCCGAGGTT GATAAATTGA TCGATGAGGC CCGCTCCACC
ACCGACAGTG CCAAGCAGAA TGCGATCTAC AAGCAGATCC AGCAGGCGAT TTCTGATGAG
GCACCGGACG TGAATTTGCT GACGAAAGTG CAGAAGGTGG CCTTCAGCAA GTGCATCTCG
GGCTATAAAT TTGTGCCAAT GCAGAGCTGG GATTACAATT TCCACGATCT GACATGGACG
TGCCCGGCCA AATAA
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| Protein sequence | MNATQTLRHL AVVLAMGTAI VAPHVAMAKT STVMNVTQVF GTIDPAKITD YTQYLAAVNL
YDGLTTVDST GKIIPELAES WDVSSDNLTY TFHLRKDATF QDGSPVEAKD VVYTVQRLLA
INKGPAYLFA TLINPDNVKA VDAHTVTITL NKVYAPFLTT TPLLLVINED AVKAASKQPW
GEDVVGEKSM GAGAYVLSSW QRGSEMVISR YEKYYAGWPT NPIDEVRFVQ TNDEATVKAL
ATSGQLGISS TTQANETYDA LAKTDGYVVQ TTPTATGFYL KLNTKATPTD DVHVRRALQY
ATDYKTIQTQ IMTGDTLAGP LAQVFKDAYL DTLKAPEFDL EKAKAELAQS KYAGKPIKLT
LTYVAGLSFE EDIALLMQSN LSQIGVDVDI KPEPWNRITE LAAKPETTPA ATQVFYGPTY
PSPDSVFYVQ YHSKSAGTWA SMEWLQDAEV DKLIDEARST TDSAKQNAIY KQIQQAISDE
APDVNLLTKV QKVAFSKCIS GYKFVPMQSW DYNFHDLTWT CPAK
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