| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5376 |
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| Symbol | |
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| ID | 7380729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 376491 |
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| End bp | 377351 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648990 |
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| Product | ABC transporter membrane spanning protein (dipeptide) |
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| Protein accession | YP_002547227 |
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| Protein GI | 222106436 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGCG AACAAGATCT CTCAGCCGGT TACATGAGCT GGTACCGCTT TTCCCGCAAT
CCTGCCGCCT TGATCGGTGC GTTGATTGTG ATTTCGGTGG TGGTCATGGC CATCCTTGCG
CCGCTGATCA CGCCGTTTCC CAGCCATATC GGCTCTGTTG TTGATTTTCG CCATCGCCAC
AATCCGCCAA ACCTCACCAA CTGGTTTGGA ACCGATAAGG TGGGCCGCGA TCTGTTCACC
CGCACCATTT TTGGCTTTCG CGTCTCATTG CTGCTGGTGT TTGGCGTGTT GGGGATTTCG
GTGCCGATTG GCGCGGTACT GGGCCTGTGC GCTGGCTATT TCGGCGGTTG GACCGAGCGG
CTGATCACCG GATTTACCAA TATCATGCTG GCTATACCAC CACTGGTCAT GGCACTGGCG
ATTGGCAATG TGCTGGAGCC AAACCTGATC AACGCCATGA TTGCGATTAC GCTTTTATGG
TGGACCTGGC ATGCGCGGCT TGTCTACCGC GTCACGGTCT CCATTGCCGG TGAAGATTTT
ATCGAGGCGG CGCGGCTAGC CGGTGCTGGC CCCATCCATA TCCTGTTTCG GGAAATCCTG
CCCAATTGCA TTGCCGTGAT TTCGGTGAAG ACCACGCTGG ATGCGGCCTT TGTCATCTTG
TTTGGCGCAA CGCTGTCCTT CCTCGGTTTT GGGGTGAAGC CGCCAACGCC AGACCTCGGC
TCGATGGTGG CCGATGGCCG TCAGTTTTTG CCGGAAAAAT GGTGGGAAGT GCTGGCCCCC
GGTGGCGCGA TTTTCTACGC CACCCTTGGC TTTAACCTGC TGGGCGATGG CTTGCGCGAC
ATGTTTGATG TGGAGGCGTG A
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| Protein sequence | MMSEQDLSAG YMSWYRFSRN PAALIGALIV ISVVVMAILA PLITPFPSHI GSVVDFRHRH
NPPNLTNWFG TDKVGRDLFT RTIFGFRVSL LLVFGVLGIS VPIGAVLGLC AGYFGGWTER
LITGFTNIML AIPPLVMALA IGNVLEPNLI NAMIAITLLW WTWHARLVYR VTVSIAGEDF
IEAARLAGAG PIHILFREIL PNCIAVISVK TTLDAAFVIL FGATLSFLGF GVKPPTPDLG
SMVADGRQFL PEKWWEVLAP GGAIFYATLG FNLLGDGLRD MFDVEA
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