| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5374 |
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| Symbol | |
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| ID | 7380727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 372952 |
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| End bp | 375291 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648988 |
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| Product | two component response regulator |
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| Protein accession | YP_002547225 |
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| Protein GI | 222106434 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAGC ATAATGCGAA ATCCATGACC GCACCACTCG ATGCGCCTAT TGGGCGAAGC
GATCTGATCG CGCGCATTGT CCATGACATT AGCCCTGTCA TCGTCGTGAC TGCGCCCGCA
GGCTTCGGTA AGTCCTGGTT TCTTCAGGCA TTGATCGCGG CGCTTGGAGC TGATGCCGCC
CTATGGACGG TCTATGATCG CCCTCCCATC TCTCCTGACC TTTCGCGGCT TGAGCAAGGA
CACCGCTATG CCATTGCCCT GCGCCCCGGC GAGAGCTTGC CCGGGCTGGA CCGGCTGCGC
CTCTATGGTC AGGTGCTGGA TCTTGATGGT GAGGATCTTC TGCTGCCGCA GGGCGGATTG
AGCAGACGTG ACTGGGACAG ATGTGCCGGC TGGCCGGTCC TGTTGTCGCC GGGGATAGAG
TGTCAGGATG CGCTTGCTGG ACAGAGCCGG CTTTCGACGT TTCTGGCCGA AGACTGTCTG
GCTGGTCTGG ATGATGCTGA TATGTCGGCG CTTCTGGTCT GTGGAGAGAA TTGGCCGTCC
TGGCTTGCCA TGCGTCTGCC GCCGCTTGCC CATCCCGCCA CCGCAGCCTG CCAAAGGATC
AAGAGCGCTT TGCCCGGCGC GCTGGAGCAA GAAATGCTCC GACGTCTTGC CGATCCGTTT
CAGGCTGCTG ATCCGTCTGG CGTTCTGGCG CAGGCTTTAC GCTGCAACCC GCGAAATCTG
GAGGCGGTGA TCCTGCGGCT GCTGGCATGC AATCAGGGCA AGGACGCACT GTCCCTGTTT
TGCAAGGCAG GGGGCTGGTT TCTCTATTAT CGGCTGGGCC ATGAGGCCTT CTTGCGTGTG
GTGACAGGTC TTGAGGCGGG CTGTGATGAC CTGCCGGAAG AACTGGCCAT CAGTCGCGCT
TTTCTGATGA TCAAAGCCGG TGATGTGGCA TGGGCAATGC AATTTCTGGT CCAGCGCTTC
GGGGTGGAAA TGCGCAATGT CCTGGCCGTT TTCTCGGGCG ATAGCGCGCT TTCCCTGCGT
GTCAGGCTGT TTCGTATCAC GGTCCTGATC TATGAGGATG TTACGCCGAC CGACAGATTG
CTGGAAGCGC TGTTTGAGAT TGGTGGCGAG CTATCCCTGG ACGAGCCGGA GCAGCGCGGA
TCCTTTTATA ACGCCATGCT GGAATTTTTC CTTCGGCTCC GGCGCTACGA AGAGGCAAAT
GGCATGGCCG AAAAGGCCAT GAAGGCCTAT CGGCAGGCGG ATTGTCCCAT TCTGTGCTTC
TATATAGCGC TGCATCAATC GGTACTCAGC CTTTTGACCT CCGATTTCAA CCGTATGGGC
CAGTCTCTGC GGCTTGCCGA GGACATGCTG GCAAAAACAG GCTTTGACAG CCCCGGAGAT
CGTCGCTTTC TTGACCTGCT GACGGCTTGC ATGGCCTATG AAAACGGCGA GCCAGCGGTG
CTGCTTGGCT TTTTACAGGA AGAGATGGCC GCAATGATTG CGGGCGAGTT ATGGCCAAGT
CTGGCCGATG TCGCCATCTA CTACGGCAGC CACGCCTTGA GTGTCCACAT GTCCACCCGC
GTCGCTCTTC GCTTTCTCGA TGGCTGGAGC GTTTACCAGC CGATGAATCG GCAGTTTCGT
CTCTCGCTGG ATGTGCGTAA GGCGCAGATC CTGCAAAGCG GCAATTGCTG GGGCGATGCG
ACCCGGCTTC TTGCGCCGTT GCGGGCCGGA TTTGATCGGG TGTGGATTGA AAGCGCGCAG
GAGGCTCTGG CCCGCTTGGC GGGTCGAGAC GAGATTACGC TAGCCTTGAG CTGGCTGCGG
CAAATCTCCT ATGAGCGCCC GGCCTTTCCC CATCTCGACC GCAAGCTTGA GGTGATGCTG
ACCAACCCGC ATCTGCTGGT CCGGCAAGAA ATTGCGGTTT CCCTCTGGCT GGCCTTCGTC
TTGCGGCAAA CGCAGCAAAA TTCCAGAGCC CGCACTCTGC TGCGACAGGT GTTTGAACGC
TGCGCAAGCC ATGGCGGACT GACGGCCCTT TCAGAGGAAT GGCTGTTTCT CGATCACCTG
CTGCAAGACA AGCGGATAGT TGAATTCGTG ATGGCGGCCA CCCCGGCGCG GGCCATCCTG
CGGCGGCTGG ACAGGGGGCG TCACAGCAGT CTTGCGGCGG CCCGGACCCG GCTGACCCAG
CAGGAGCTGA AAATCCTGAC CATGCTGGCG GAAGGCGCCT CCAACAAGCT GATTGCCCGC
AACAGCGGCA TTTCAGAGCC CACGGTGAAA TTTCATCTGA AAAATGTCTA TCGCAAACTT
GGCTGCTCCC GGCGTCACGA GGCGATTGCG GCGGCGAAGG CGCTGGGTTG GGTGCGCTAA
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| Protein sequence | MSKHNAKSMT APLDAPIGRS DLIARIVHDI SPVIVVTAPA GFGKSWFLQA LIAALGADAA
LWTVYDRPPI SPDLSRLEQG HRYAIALRPG ESLPGLDRLR LYGQVLDLDG EDLLLPQGGL
SRRDWDRCAG WPVLLSPGIE CQDALAGQSR LSTFLAEDCL AGLDDADMSA LLVCGENWPS
WLAMRLPPLA HPATAACQRI KSALPGALEQ EMLRRLADPF QAADPSGVLA QALRCNPRNL
EAVILRLLAC NQGKDALSLF CKAGGWFLYY RLGHEAFLRV VTGLEAGCDD LPEELAISRA
FLMIKAGDVA WAMQFLVQRF GVEMRNVLAV FSGDSALSLR VRLFRITVLI YEDVTPTDRL
LEALFEIGGE LSLDEPEQRG SFYNAMLEFF LRLRRYEEAN GMAEKAMKAY RQADCPILCF
YIALHQSVLS LLTSDFNRMG QSLRLAEDML AKTGFDSPGD RRFLDLLTAC MAYENGEPAV
LLGFLQEEMA AMIAGELWPS LADVAIYYGS HALSVHMSTR VALRFLDGWS VYQPMNRQFR
LSLDVRKAQI LQSGNCWGDA TRLLAPLRAG FDRVWIESAQ EALARLAGRD EITLALSWLR
QISYERPAFP HLDRKLEVML TNPHLLVRQE IAVSLWLAFV LRQTQQNSRA RTLLRQVFER
CASHGGLTAL SEEWLFLDHL LQDKRIVEFV MAATPARAIL RRLDRGRHSS LAAARTRLTQ
QELKILTMLA EGASNKLIAR NSGISEPTVK FHLKNVYRKL GCSRRHEAIA AAKALGWVR
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