| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5342 |
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| Symbol | |
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| ID | 7380700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 342884 |
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| End bp | 343633 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648961 |
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| Product | ABC transporter |
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| Protein accession | YP_002547198 |
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| Protein GI | 222106407 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGTA ATGTCGCCCC CCTTCTCGAA GTTCGTAATT TTTCCCGGTA TTTCGGCGCT
GTGAAAGCCC TTGATAATTG CTCGCTGACG GTCGGTGCCG GTGAAGTCGT GGCCTTGGCC
GGCGACAATG GCGCCGGAAA GACCACCATG ATCAAGGCGA TCTCCGGGGT CTATTCGCCC
ACTTCGGGTG AAATTCTGAT CGATGGCTCC CCGGTTGCCT TTTCCTCGCC GCAGGATGCC
CGGGAAAAGG GGATCGAGAC CATTTACCAG GACCTGGCTC TCGCCGATAA TCTGTCCATT
GGCGCCAATA TTTTTCTTGG CCGTGAGCCA ATGAAACGCG CTTTTGGTTT TATTCCAGTC
CTTGACCGCA AGGCGATGGC CAAGGCCGCA GCCGATACGA TGGCTCTCCT GGACTTCCAT
GTGAAGCGAC TGGATGCCCC GGTCAGCAAT TTTTCGGGCG GACAGCGCCA GGCGGTGGCA
ATCGGTCGGG CCGTTTACTG GAATGCCAAG ATCCTGATCA TGGACGAACC GACAGCAGCG
CTGGGCGTGC CGGAGCAGCG TAAGGTTGTT GCGCTGATCA AATCGCTGAA AGCCCAAGGT
CGGGGCGTTA TTTTCATCTC CCATAATTTG CAGGACATAT TCGCGGTATC GGACCGTATC
GTTGTCCTGA GACGGGGTGT TGTCGCGGGA ACGCGCAATA TTGCCGATAC CAACCACGAC
GAAGTCGTCA AGCTGATGAT TGGTGGGTAA
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| Protein sequence | MLSNVAPLLE VRNFSRYFGA VKALDNCSLT VGAGEVVALA GDNGAGKTTM IKAISGVYSP
TSGEILIDGS PVAFSSPQDA REKGIETIYQ DLALADNLSI GANIFLGREP MKRAFGFIPV
LDRKAMAKAA ADTMALLDFH VKRLDAPVSN FSGGQRQAVA IGRAVYWNAK ILIMDEPTAA
LGVPEQRKVV ALIKSLKAQG RGVIFISHNL QDIFAVSDRI VVLRRGVVAG TRNIADTNHD
EVVKLMIGG
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