| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5341 |
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| Symbol | rbsC |
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| ID | 7380699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 341848 |
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| End bp | 342894 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648960 |
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| Product | ABC transporter membrane spanning protein (ribose) |
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| Protein accession | YP_002547197 |
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| Protein GI | 222106406 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4158] Predicted ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCCCG AGAACACCCA CGCCGTCGCA CCTCAGGCAG ACCATGCCGA CGTCACCAAG
ACGATCGTGC AGCGCATTGC TCAGTTGCGG GCGTGGGTCT TTCTGGCCGC ACTCATTGTG
ATCTTCGAGA TTTGGGCGCA GACAGATTTT GGAGGGACGT TCGTTGGTTC ACCCTTCAAT
TGGCAATCGG TTGCGGTCTT TGCCGTTGCG CCCCTTCTGT TGGCAATCGG CCAGACCTTC
GTCATCATCT CTGGCGGCAT CGATCTTTCC GCAGGTTTCA TCATGGGGCT TGCGGCGGTT
GTCGCTGCCC ACGCCACCAA TTATTTCGGG GTTTTCATGC CTTTGCCGGC TGCCATGGTA
TGCGGCATCC TCGTCGCCAT CCTTGCAGCG ACAATTCCAG GCATCATCAA CGGGCTGCTG
ATCTCCAGGC TGAACGTACC CCCTTTTATC GGCACGCTCG GCATGTTTGG CGTTGCCCGA
GGAGCGGCTT TCCTTCTTGC CGGAGGAACA ACGGTACCCG TCAAAAACTC CTATTTCGCA
GCGCTTGGGA ATGGACGGAT AGAAGGTATC CCTTATCTCG TTCTGGTGAC CGCCGTTTTC
GTGCTGTTTA TGCATTACAT TCTCAGCCAG ACACGGTTTG GGCAGCATAA TTATGCGATT
GGCGCCAATG CCCAGGCCTC ACGCCGGGCA GGCATCGATA TCAAAGGCCA TATTTTGCGG
CTTTATATCC TGTCCTCTGT CTGCGCGGGT CTTGGCGGCG CATTATACGC CGCGCGTTTC
ACGGCAGGCG CTGCCCAGGC CGGGGAACCC TTGCTTCTCG ACAGCGTAGC GGCCGTGGTG
ATTGGCGGTG CCAGCCTGTT TGGCGGCTCG GGAACAATCA TCGGAACGGT GGCGGGAGCC
CTGGTCATCG CGGTCATCCA GTATGGCCTG GTGTTCATGA ATGTTGAGCC ATTCTGGCAA
TTCATTGCCG TTGGCGTCGT CATCATCATT TCCGTTCTTA TCGATCAGGC GCAACGCCGC
TTCAGTGGAG TCAAACATGC TGAGTAA
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| Protein sequence | MAPENTHAVA PQADHADVTK TIVQRIAQLR AWVFLAALIV IFEIWAQTDF GGTFVGSPFN
WQSVAVFAVA PLLLAIGQTF VIISGGIDLS AGFIMGLAAV VAAHATNYFG VFMPLPAAMV
CGILVAILAA TIPGIINGLL ISRLNVPPFI GTLGMFGVAR GAAFLLAGGT TVPVKNSYFA
ALGNGRIEGI PYLVLVTAVF VLFMHYILSQ TRFGQHNYAI GANAQASRRA GIDIKGHILR
LYILSSVCAG LGGALYAARF TAGAAQAGEP LLLDSVAAVV IGGASLFGGS GTIIGTVAGA
LVIAVIQYGL VFMNVEPFWQ FIAVGVVIII SVLIDQAQRR FSGVKHAE
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