| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5325 |
|---|
| Symbol | |
|---|
| ID | 7380686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011988 |
|---|
| Strand | - |
|---|
| Start bp | 324890 |
|---|
| End bp | 325237 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643648948 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002547185 |
|---|
| Protein GI | 222106394 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGCAACA CGGTTCATGC CGTGCCGAAC CCGCTGTGCC AGCTTGCTAT CCTGTCATGC
CAGTTCAAGG AAGCCAGATC GATGTTTACC AGAACCAAGA CACGCATCGT GCATTTCGAA
TGCCCTTTCA CCCTTCCGGG CCTTGAGGGT ACGCAGCCCG CCGGTGACTA TCAGGTCAAG
GATGATGAGG AACAGATTAC TGGCATTTCC TGGCTCGCCT ATCGGCGGGT GGCAACGCTG
ATCGAAATTG CCAAGGGATC GACAACAAGC CTTGTCGCCA TCGACAATTT GGATCTGGAC
GCCGCCATCG AGAAGGATCG GGGGACATCC ATCACCGCAA CTGGATAG
|
|---|
| Protein sequence | MRNTVHAVPN PLCQLAILSC QFKEARSMFT RTKTRIVHFE CPFTLPGLEG TQPAGDYQVK
DDEEQITGIS WLAYRRVATL IEIAKGSTTS LVAIDNLDLD AAIEKDRGTS ITATG
|
|---|
| |