| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5297 |
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| Symbol | |
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| ID | 7380664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 299916 |
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| End bp | 301247 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643648926 |
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| Product | oxidoreductase |
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| Protein accession | YP_002547163 |
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| Protein GI | 222106372 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.893259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGGTC CCTATGTTGT TCCCGTCCAT GGGGATGCGG AACTACCGAG CCACGTGGAT
GTCGTTGTTA TCGGCGGCGG CATTATCGGT ACATCCACCG CACTTGAACT CGCCGATCAG
GGATTGAGAG TGGCGCTCTG CGAAAAAGGC GGCATCGGCC ACGAACAGTC CAGCCGCAAC
TGGGGTTGGG TTCGGATTTC GAGACGCGAT CCGCGCGAAG TGCCGTTGAT GGCCGAGTCG
CTGCGCATCT GGACCGATCT TAACCGCCGC ACGGGCCGGG AAACCGGCTT CAAGCGTTCA
GGCATCGTGT TTACCTGCGC CACCGAGAAG GAATTTGCCG AACACGAGCG CTGGAACAGC
AATCTGGACG GCTATCAGAT CGAAAGCCGG ATGCTGAGCG CCAAGGAGTT CCGGGAGAAA
TATCCAGGCT CCGACATGAA TATTGCCGGT GCGCTTTACA CAGCGGGTGA CTGCCGCGCC
GAACCGCAGA AGGCCGCACC CGCCATTGCC GAGGCGGCCC GCGACCGGGG CGCCTTCATC
CTCACCGAAT GCGCGGTGCG CGGTCTCCAG CTTTCCGGCG GCAAAGTGTC AGGTGTGGTG
ACGGAGCGCG GGGAGATCGC CTGCCAGTCC GTCGTCCTGG CGGGCGGTGC CTGGTCCAAC
CTGTTCTGCG GCAATAACGG CCTCGACCTT CCGCAGTTGA AGGTGATGAA TTCCGTGCTG
CGCACCAAGC CGCTGGAGGG TGGCCCGGAG GAGGCGATCT GGTCAAATGG ATTTGCCATT
CGCAAGCGGT CGGATGGCGG CTACACGATT GCCAACGGCT TTCAGAATAT CGTCGATATC
GTGCCAGCCT CTTTCCGGTA TGCGCGCAAT TTCCTGCCCG CGCTGCGCCA TGAATGGCGT
TCTCTCGATC TGCGGCTGAC GGGCCGGTTC TTCGATGAAT GGCGCATTCC GCGCCGCTGG
TCGCTCGATG AGGCGTCTCC GTTCGAATAC AACCGCGTGC TGGACCCTGT GCCGTCAAAG
GCGATGACCG ACGGTGCGCT GGCCCAGCTC AAGAAGGCTT TCCCCATCTT CGAAAAGGCG
GAGATTTCGC AGCGCTGGGC CGGCATGATC GATGTGACGC CCGATGCCAT TCCGGTTATC
GATGCCATCG ACGCCATTCC CGGCTTTCAC GTCGCCACTG GCTTTTCCGG CCATGGTTTC
GGCATCGGAC CGGCTGCCGG TCGGCTGATG GCCGATATCG TCACGGGACG CAATCCGATT
GTTGACCGCA AGGATTTCCG GTTCAGCCGC TTTAGCGATG GCTCGAAAAT CGAACTGATC
AGCGGCTTTT GA
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| Protein sequence | MPGPYVVPVH GDAELPSHVD VVVIGGGIIG TSTALELADQ GLRVALCEKG GIGHEQSSRN
WGWVRISRRD PREVPLMAES LRIWTDLNRR TGRETGFKRS GIVFTCATEK EFAEHERWNS
NLDGYQIESR MLSAKEFREK YPGSDMNIAG ALYTAGDCRA EPQKAAPAIA EAARDRGAFI
LTECAVRGLQ LSGGKVSGVV TERGEIACQS VVLAGGAWSN LFCGNNGLDL PQLKVMNSVL
RTKPLEGGPE EAIWSNGFAI RKRSDGGYTI ANGFQNIVDI VPASFRYARN FLPALRHEWR
SLDLRLTGRF FDEWRIPRRW SLDEASPFEY NRVLDPVPSK AMTDGALAQL KKAFPIFEKA
EISQRWAGMI DVTPDAIPVI DAIDAIPGFH VATGFSGHGF GIGPAAGRLM ADIVTGRNPI
VDRKDFRFSR FSDGSKIELI SGF
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