| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5281 |
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| Symbol | |
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| ID | 7381399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 281341 |
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| End bp | 282822 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643648911 |
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| Product | oxidoreductase |
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| Protein accession | YP_002547148 |
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| Protein GI | 222106357 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGATC CTCTCCCCGA TGCCGTGGCC GCACTTGCTC GTTTAAAGGA CGCGGCAAGG
GCCGATCTTG CCGCCCTCGC CTATCCGGCG GCTCCCTGGC TTGCGCCACT GTCCATCTCC
GCACCATCCG TCTGCGATGT CGCCATCGTT GGCGGGGGAC AGTCGGCGAT CACCATAGCG
GCGGCGCTGA AATGGGATGG GGTCCAGCAG ATCCGCCTGT TCGACAGCGC CCCGGCCGGC
TCGGAAGGGC CGTGGACCAC CTTTGCCCGC ATGGAAGAAT TGCGCACCCC TAAAACGGCG
GTCGGCAACG AATTCAACGT CGCCAATCTC TCGGTGCGTC GCTGGTTCGA AACCCGCTAT
GGCATTGAGG CCTGGCAGAC GCTGGGCCGC ATCCCCCGCA CCGACTGGAA GGCCTATCTG
GACTGGTATG CCGAGGTTTT CGACATTGCC ATCACCAATG AGACCCGCGT GACGGACGTC
TCGCCGGAAG GCGACCTGAT GGCCGTCACC ACTCTGCGGC AGGGCCATGT CGAGCGCCAT
CTGGCGCGGG CCGTGGTTCT GGCCACCGGC TTTGACGGTG CCGGTGCCTG GCGGGTGCCG
CGTTTCATTT CCGACGCTTT GCCATCGCAG CGCTATGACC ATACCAATGG ACAGGTGGAT
TTTAAGCGTT TGAAGGGCAA GCGGATCGGC ATTCTCGGTC ACGGTGCCTC GGCCTTCGAC
AATGCCGTCA CCGCGCTGAA CAGCGGTGCT GCCTCGGTCG ATCTCTGCTT TCGCCGGAAA
CAACTGCCCC GCACCAATCC GCACCGTGCA CTGGAAGCAC CACCGCTTCT CAGTGGTTTC
GGGGCGCTGT CCGACCAAAC CCGCTGGCAA ATCGCCCGGT TTTTCCGCAG CACCGACCAG
CCGCCACCGG TGCGCGCCTT TGAGACAGCA ATGGCCCTGC CAGGCTTTAC CCTGCGCCCC
GCAACGCCTT GGCTGGAAGT GTGTGAAAAG GACGGCGCAG TCTCGGTGAA AACGCCCGAT
GGCGTGCTGG TCTTCGATCA TCTGTTGCTG GCAACAGGCA TGGATGTCGA TCTCTCAGCG
CGCCCGGAAT TGAAAACCCT GGCCCCGAGG ATCGCGGTTT GGGGTGAGCA TTTCACGCCT
TCAGCCGGAG AGGAAGACGC CCGGCTGTCG CAATTGCCCT ATCTCGACCC CTATTACGCA
TTCCTGCCGA AGGTGCCGGA AGACGGCTGG GTCAGCCGGG TCTTTGCCTT CAACAGCGCG
AGTTTCGTCA GCCATGGCCC GCATTCCACC TCAATCAGCG GCCATCGCTA TGCCCTGCCA
AGGGTGGTGC GCGGCATTGA GCGCCGGCTG CTGCTGGATC AGGAAAACGC AATCCTGCCG
GGGCTGGAGG CTTATAGCTC GCAGGACCTG CCGGTCAGTG ATGATTTCGA AGCTGTTATT
GCTGCCCGAA ATGCAGCACG GATGATGGAA AAAGCATCAT GA
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| Protein sequence | MLDPLPDAVA ALARLKDAAR ADLAALAYPA APWLAPLSIS APSVCDVAIV GGGQSAITIA
AALKWDGVQQ IRLFDSAPAG SEGPWTTFAR MEELRTPKTA VGNEFNVANL SVRRWFETRY
GIEAWQTLGR IPRTDWKAYL DWYAEVFDIA ITNETRVTDV SPEGDLMAVT TLRQGHVERH
LARAVVLATG FDGAGAWRVP RFISDALPSQ RYDHTNGQVD FKRLKGKRIG ILGHGASAFD
NAVTALNSGA ASVDLCFRRK QLPRTNPHRA LEAPPLLSGF GALSDQTRWQ IARFFRSTDQ
PPPVRAFETA MALPGFTLRP ATPWLEVCEK DGAVSVKTPD GVLVFDHLLL ATGMDVDLSA
RPELKTLAPR IAVWGEHFTP SAGEEDARLS QLPYLDPYYA FLPKVPEDGW VSRVFAFNSA
SFVSHGPHST SISGHRYALP RVVRGIERRL LLDQENAILP GLEAYSSQDL PVSDDFEAVI
AARNAARMME KAS
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