| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5271 |
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| Symbol | gatA |
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| ID | 7381391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 271655 |
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| End bp | 273064 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643648903 |
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| Product | glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_002547140 |
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| Protein GI | 222106349 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.171367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCTG ATGCTACTGC TCTGGCCCAA GCGATCGCAC ACGGTCGCTT GTCTGCCACC
GAGGCAATGA AGGCCTCAAT TTCTGCCGCT GAGACGCTCA ACGATCTGGG TGCCATTGCC
TATATGGATG CTGAAAAAGG CCTTGAGGCG GCGCGGGCAC TCGATGCCCT GCCGCTGGAT
GCCAAGCCGC GCTCTGCCAT GGCCTTTGCA GGCGTGCCAA CGCTTGCAAA GGATCTGGGC
GGGCCGTTTG CGGGTTTTCC GGTGGTGGCG GGATCAAGGC TCATGGCGCG CCGTGGCGGG
CTGGTTGATT CCGATCTGGC AGAGCGGTTC CGCAGCAAAG GCTTTTGCGT TTTCGGCCTG
ACCACCAGCC CAGAATTCGG CCTTTCGCTG GCAAGCGAGC CGCAGATCGG ACCCATCTGC
CGCAATCCGC TGGATAGTGC CCGCACGGCT GGCGGGTCTT CTGGGGGTGC TGCGGCGGCC
GTTGCTGCTG GCATTGTGGC CATTGCCCAT GCCACCGATG CGGGCGGCTC CATCCGTGTG
CCCGCTGCCT GCTGCGGCCT TGTTGGCCTG AAACCCAGCC GAGGGGCCAT GCCGTCTGGC
CCCAGCTTTG GCAATCATCT GGGCGGTATT GCCAGCGAGT TGGTCGTTTC CCGATCCGTG
CGCGACACGG CAACCAGCTT TTCTGTGCTC AGTGGCAATG TGAAAGGTCC ATTCCCGCCA
TTTTCTCCCA CGCTGCCAAA GGCTGGCCGC TTGCGCATCG GCATTCTCAC CGACACTGGC
GATCAATATG CCACCGACAG TGAACGCTTG GTGGCCATTG ATGAGGCAGG GCGGGCATTG
GAAGCCGATG GTCATCAGCT TGTGCCCATT GTCTTTTCAC AAATCGCCCA GCCAGCGGCG
GCAAGCAACG ATGCCTTTGT CAATATTGTC TGCGCCAATC TTGCCGAGAC GTTTTCGAAA
TTCAACCTTG ATGCATCCAA GACGGAAACA CTGACACAGG CGACCATTGA GCGTGGGCTG
GCACTGCCCG CCGCCCTCCT TTGGCGCAGC CTCAATGCCA TGGTGCTTGT CAGCCGCGAT
CTCTGGCGGT TGTTCGACGA TGTCGATTGT CTGTTGTGCC CAATGCTATC ATCGGCACCC
TTGCCGATTG GCTCTTTCCC CAGCGATCAT CGTGATACCG ATCTGCATTT CGACCGCATG
GCCCGCTTTG CACCACTCGC AGCCCTTGCC AATGCTTCAG GATGCCCGGC CATCACCCTG
CCCTATGGAA GCGATGCGTC CGGCTTGCCG CTTCCGGTGC AAATGCTGGC CCCGATGGGC
AGTGAGCCGC TGCTTTTGCA ACTGGCCGCC CGCCTTGAGA GTGACCAACG GTTCCAGCAA
AGATTTCCGA TTGCTGGATT TGCACCATGA
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| Protein sequence | MQADATALAQ AIAHGRLSAT EAMKASISAA ETLNDLGAIA YMDAEKGLEA ARALDALPLD
AKPRSAMAFA GVPTLAKDLG GPFAGFPVVA GSRLMARRGG LVDSDLAERF RSKGFCVFGL
TTSPEFGLSL ASEPQIGPIC RNPLDSARTA GGSSGGAAAA VAAGIVAIAH ATDAGGSIRV
PAACCGLVGL KPSRGAMPSG PSFGNHLGGI ASELVVSRSV RDTATSFSVL SGNVKGPFPP
FSPTLPKAGR LRIGILTDTG DQYATDSERL VAIDEAGRAL EADGHQLVPI VFSQIAQPAA
ASNDAFVNIV CANLAETFSK FNLDASKTET LTQATIERGL ALPAALLWRS LNAMVLVSRD
LWRLFDDVDC LLCPMLSSAP LPIGSFPSDH RDTDLHFDRM ARFAPLAALA NASGCPAITL
PYGSDASGLP LPVQMLAPMG SEPLLLQLAA RLESDQRFQQ RFPIAGFAP
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