| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5249 |
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| Symbol | |
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| ID | 7381371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 244751 |
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| End bp | 245893 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648883 |
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| Product | transcriptional regulator ROK family |
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| Protein accession | YP_002547120 |
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| Protein GI | 222106329 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.574642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGACAA GACAACGGCC TTTGCACGGC ATCGGCACCA CGCAAGCGGC GGTGCTGAAA
CACTTGCGGC GAAACGGCAT TGCGTCGCGT GCAGAACTCG CGGAATTGTG CGGCGTGACC
CAGGCTGCCG TCAGCATGAT GACCCGTGAC TTGATCGCGC GCGGCATCGT TATCCAGGGA
GCCAGACGGC AAAGCCAGCG CGGCGCGCCT CACATCGACC TCATGCTCGC CGGAAACATC
GGATATGCGC TTGGGGTGCA TGCCAACAGC TATTCGCTGA CAGTGACGCT GCTCGATTTT
TGCGGCAACC GGATTGGCGA ACAGCAGCTT GAAGGGCCTT ACGACAGATT TTCCGACATT
CAGACGGCGA TCAAATCGCT CAGAACCGAC TTGCTGACAT CAAACGGCAT TGATGAAGGC
CTGCTGATCG GCGCCGCTGT GGCCATGCCA ACCCGTTTCC GTCACGGCAC TGCCTTCCTC
GATCTCGCGG AGGAAGTCGT TTCCTGGGCA GGCTCGGATC TGGCCTCGAC CCTGCGCGAG
ACACTTGACT GTCCGGTGAT GATTGAAAAC GATGCCAATG CTGCGGCCAT GGGCGAGCTT
GCCTTGGGCA ATGCCAGCGG ACACGATAAT TTTGCCTATC TTTACCTGTC CGAGGGCATT
GGCAGCGGCA TCATCATTGG CAAGGAACTT TATCGCGGCA ATCTGGGAAA TGCTGGCGAA
GTGGGCGCGC TTCGCGCGCG CGGATTATCG CGCCCCTCTT TTGACGACTT GGCAGCCTGG
TGCAAAGAGC ATCAGGGACA CATCCCGAAA GGCCGGTCTT CCGACCAATG GACAGCATAT
CTGCAAGCAA ACCCGACAGT TCTTGATGCA TGGCTGAGGA GAGCCGGGCC GGAATTAGCC
ACGCTCGCCT TTATGGTGAC AGCCGTTCTT GCGCCATCGG CGATCTATAT CGGTGGAACA
CTGCCCAGAC TGGTAAGGGA AAAGCTAGCA CCATGGCTTG ATTTCTCAAC ATCGAATCCG
TTCGATGGAG CGCGGGTCAT TCAACCTGAT ATCCTCATCC CGCAAATCTC AGCGGTCGAT
GCCGTCGCGT TTGGCGCCGC AGCTATGATC CTTCATAGCG TGCCGGGCAA TCCGGGTCTC
TGA
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| Protein sequence | MLTRQRPLHG IGTTQAAVLK HLRRNGIASR AELAELCGVT QAAVSMMTRD LIARGIVIQG
ARRQSQRGAP HIDLMLAGNI GYALGVHANS YSLTVTLLDF CGNRIGEQQL EGPYDRFSDI
QTAIKSLRTD LLTSNGIDEG LLIGAAVAMP TRFRHGTAFL DLAEEVVSWA GSDLASTLRE
TLDCPVMIEN DANAAAMGEL ALGNASGHDN FAYLYLSEGI GSGIIIGKEL YRGNLGNAGE
VGALRARGLS RPSFDDLAAW CKEHQGHIPK GRSSDQWTAY LQANPTVLDA WLRRAGPELA
TLAFMVTAVL APSAIYIGGT LPRLVREKLA PWLDFSTSNP FDGARVIQPD ILIPQISAVD
AVAFGAAAMI LHSVPGNPGL
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