Gene Avi_5230 details

Gene Information

• Locus tag: Avi_5230
• ID: 7381358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 231161
• End bp: 231814
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643648870
• Product: L-fuculose-phosphate aldolase
• Protein accession: YP_002547107
• Protein GI: 222106316
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAAT TCATGGCCCA GCGGCAGGAG ATTGCCGATA TGTGCCGCTA TTTCGCGGAT 
AATGGCTATT TTGCCGGAAC CGGCGGCAAT ATCGGCGTCC GCGTCGATAA GCAATTGATG 
GCGGTCACCC CCTCGGCCTC CGACTATTAC ACGGTCGAGG CGAAAGACGT GGTGATCCTC 
GATATCGAGA CCCTCGACAT TGTCGAGGGC GACAAGACGC CGACCATTGA AAAGGGACTG 
CATGCCAGGA TGCTCCTTAT GCATCCTACC CGCCATGCCA GTGTTCATAC ACACCAGCCT 
ATCGCAAGCG CTGTCGCCCT GCTGCATGAA ATCCTGCCCT GGCCAAGGGG AAGCGATCTT 
GGGGCACTGG GTCCCCACGT CGCGCTTATT CCCTACAGGC CGTCAGGCAC GGGAATGCTG 
GCAAAGATTT TTGCGAAGTC CCTGCGGCCC GACATCTTTG CATATCTTCT GGCCAGTCAC 
GGCGTCATCT GCGCGGGGGC CGATCTCAAG ACCGCCGCGG GCATGATCCG CAAGATCGAA 
GCCGCCGCCG CCGCCCACCT GCGCGAACGC ATCAACAAAC ACGTCAATCT GGATCGGCAA 
CTCCAGGCGT TCATTCTGAA CGTTCTGGAC AAGGCTGAGA CCAAGGGAGC TTGA 

 

Protein sequence

MAKFMAQRQE IADMCRYFAD NGYFAGTGGN IGVRVDKQLM AVTPSASDYY TVEAKDVVIL 
DIETLDIVEG DKTPTIEKGL HARMLLMHPT RHASVHTHQP IASAVALLHE ILPWPRGSDL 
GALGPHVALI PYRPSGTGML AKIFAKSLRP DIFAYLLASH GVICAGADLK TAAGMIRKIE 
AAAAAHLRER INKHVNLDRQ LQAFILNVLD KAETKGA