| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5229 |
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| Symbol | |
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| ID | 7381357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 229570 |
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| End bp | 231168 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648869 |
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| Product | xylulose kinase |
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| Protein accession | YP_002547106 |
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| Protein GI | 222106315 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAATT CTGACCAATA TGTTTTATCG ATCGATCTTG GCACCAGTGG CTGCAAAGTT
GGATTGGTGT CGATTACCGG ACACGTGGTT GCCTGGGCAT TCCGGTCGGT GCCGCTCCAG
GTAATCGATA CGATCGGGGC AGAGCAGGAT CCCTCTCAGT GGTGGAACGC CTTCATCGAA
GCAAGCCAGG ATGTGCTCAG CCAGAGTGCC GCGCTGCGTG AGAATATCGT CGCCATCTGC
TCATCTACCC AAGGCGAGGG AACTGTTGCC GTTGACCGTG ACGGCAATGT GTTGATGAAC
GCGATTATCT GGCTCGATAT GCGCGGCGCC CGCTATCTGA AGAAGGAAAT GCGCGGTGCA
ATGAAGGTCG CGGGCTATGA CGCGATCAAG TTGCAGAAAT GGTTGAGGCT ATGTGGCGGT
GCCCCGGCTC TGTCCGGCAA GGACCCAGCG GGCCACATGC TGCTGATCCG CGATGCTTTC
CCTGATATCT ACGAGAAGAC CTACAAGTTT CTCAACGTTC TCGATTTCTT CAATCTGCGT
CTGACAGGCC GGTTTTGCGC CACGCAGGAT TCCATTCTCA CCTCCTGGGT GACTGACAAT
CGCGATGTCA ACCATATCCG CTATGATGAC GGGTTGATCG GTGCCAGCGG TATCGACAAG
GCGAAATTTC CCGATCTCGT CAGGTGTACG GATATCGTTG GAACTCTGCT TCCTTCCGTT
GCCGATCTGT TGGGCCTGTC ACCGAAAACG CCGGTCGTTG CCGGTGCCAT CGACAATTCA
GCCGCCGCGA TTGGCGCTGG AACGCTGGCC GATTATGATA CCCATCTTTA CATGGGATCA
TCTTCCTGGA TCTCGGCCCA TGTGCCTTTC AAGAAAACCA GTGTGATGGA CCAGATCACA
TCGGTTCCTT GTCCGGTACC ATCGAAATAC CTGATGATCG CCATGCAATC GAGCGGGGCG
AGCAATATCG CTTTCCTGAA GGACCGTATT GTCTTCCATG ACGATGGCCT GATCGATTCC
GAACCGACGC CTGATACTTA CAGGCTTCTC GATGAGATTG CCGCCCGCAC ACCTGCCGGA
GCGGCTGGCA TGATGTACCT GCCCTGGCTT TTCGGCGAAC GCTGCCCGGT GGATGACCCG
ACTCTTCGGG CCGGGATCTT CAACATGAGC ATGGAGCATA ACCGCGAGAC ACTGGTGAGG
GCGGTCTTCG AAGGCGTGGC GCTCAATACA CGCTGGATGA TGAAGCCGGT CTCCCGCTTT
CTTGGCCGAA GGCCTGAGGC AATCACCATG ATCGGCGGCG GTGCGATGTC GCCCGCCTGG
TGCCAGATCT TCGCGGATGT TCTGGGCGTC CAGATCCGCC AGCCACATGA TCCGATGAAA
GCCAATGCAC GCGGTGCGGC CTTCATCGGG GCTGTGGGGC TCGGCCTCAT CCAGTTTGAC
GAGGTCGCGC GCCATGTGGT GATCGATAGG GTTTACGATC CTGATCCGGC AACGCAGCGG
CTCTATGACG AGCGCTTCGG TATCTTCACG GAACTCCATC GGCGCCTGGC GCCGCTTTAC
AAACGTCTGA ACGGATCGAA GGGCAAGATT CATGGCTAA
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| Protein sequence | MANSDQYVLS IDLGTSGCKV GLVSITGHVV AWAFRSVPLQ VIDTIGAEQD PSQWWNAFIE
ASQDVLSQSA ALRENIVAIC SSTQGEGTVA VDRDGNVLMN AIIWLDMRGA RYLKKEMRGA
MKVAGYDAIK LQKWLRLCGG APALSGKDPA GHMLLIRDAF PDIYEKTYKF LNVLDFFNLR
LTGRFCATQD SILTSWVTDN RDVNHIRYDD GLIGASGIDK AKFPDLVRCT DIVGTLLPSV
ADLLGLSPKT PVVAGAIDNS AAAIGAGTLA DYDTHLYMGS SSWISAHVPF KKTSVMDQIT
SVPCPVPSKY LMIAMQSSGA SNIAFLKDRI VFHDDGLIDS EPTPDTYRLL DEIAARTPAG
AAGMMYLPWL FGERCPVDDP TLRAGIFNMS MEHNRETLVR AVFEGVALNT RWMMKPVSRF
LGRRPEAITM IGGGAMSPAW CQIFADVLGV QIRQPHDPMK ANARGAAFIG AVGLGLIQFD
EVARHVVIDR VYDPDPATQR LYDERFGIFT ELHRRLAPLY KRLNGSKGKI HG
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