| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5225 |
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| Symbol | fadL |
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| ID | 7381353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 223660 |
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| End bp | 224841 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643648865 |
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| Product | long-chain fatty acid transport protein |
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| Protein accession | YP_002547102 |
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| Protein GI | 222106311 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.84588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTC AATATTCTTG GCGAGCGCCT CAATTTGCGC TGGCAATATG GGTGGGCGCA
CTATCGTTTG CGCCTTGCGT TGCAATCGCG GGCGGCTTCA GCAGAGGCGA GGCAGACACT
GATATTCTGT TTACGGATGG AAACTATAGT TTACGCACCG GAGCAATATA TGTCTCACCA
AGCCGCTCAT TTTCAACCCT GAACGGCGCC CGTGCTTCTG ATAAAGCCTA TTCGGATGAG
TTTTGGATAC CAAGCGTCGC CGTCAAGGCA ACGCTTGGTT CCGGTATCGC CTGCGCTTTG
ACATATACGC AACCATTTGG CGCATCTGCA ACGTATGGAA GCCAGGCGCA GAACGCCGAA
TATACCACAG CTGTGAGCCA GGGATTGCCT CTCGTCAATC CAACCTCAAA AATGCAGTTT
TCGACGGATG AATATGGTGC AACCTGCGAT GTGCGGGTGG ACGCCGGGCC GGGCCGCTTT
TACGTGATCG GCGGCGTCTT TCTGGAAAGC TTCGAATACA AAGAAAACAC CCTTTACGGT
AACATTCGGT TGAAGGATGA CGGTGCCTTA GGCTACCGAG TGGGCGCCGC TTACGACATT
CCCGAATATG CCATGCGCTT CCAGCTCATG TACCGATCGC AAGTCTCGCA TGATGCGGAA
GGGACATTCA CGCCCTCAGC GCTGGCCGCT GCTGCCGGTG TGACAGACAC AGCACCTGCT
AACGGAACCG GAACCCTACC GCAGTCGATC AAGCTCTCTG CCCAGACCGG CGTCGCGCCG
GGTTGGCTGG TTTACGGTTC CTTGACCTGG ACAGACTGGA GCGTTCTTCA AAACTTCAGA
TATGACGTCA CCGGGCTTGG CACAAGCAAC AAGGCCTTCA ACTATAAGGA CGGCTACACG
GTGCAGATTG GTGTTGGTCA TGAATTTACA GAAAAACTGT CTGGAACGGT CAACGTGACC
TGGGATGAAG GCGTAGGGAC AGGAGCAGAC ATTACGACCG ATACATGGTC GCTTGGACTA
GGCGCCGAGT ACAAAACCAA ATTCGGTAAA TTCGATCTCG GAACCTCCGT CTCTTACCTC
ACTGCCGGTT CACAGAGCGT CAGCGCCGGA GCGACTTATG ACGCAACCGC CAAGCATGAT
TGGGCGGTCG CCGTTGGATT GGGGTATCTG ATCGAATTCT GA
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| Protein sequence | MSSQYSWRAP QFALAIWVGA LSFAPCVAIA GGFSRGEADT DILFTDGNYS LRTGAIYVSP
SRSFSTLNGA RASDKAYSDE FWIPSVAVKA TLGSGIACAL TYTQPFGASA TYGSQAQNAE
YTTAVSQGLP LVNPTSKMQF STDEYGATCD VRVDAGPGRF YVIGGVFLES FEYKENTLYG
NIRLKDDGAL GYRVGAAYDI PEYAMRFQLM YRSQVSHDAE GTFTPSALAA AAGVTDTAPA
NGTGTLPQSI KLSAQTGVAP GWLVYGSLTW TDWSVLQNFR YDVTGLGTSN KAFNYKDGYT
VQIGVGHEFT EKLSGTVNVT WDEGVGTGAD ITTDTWSLGL GAEYKTKFGK FDLGTSVSYL
TAGSQSVSAG ATYDATAKHD WAVAVGLGYL IEF
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