Gene Avi_5209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5209 
SymbolenvZ 
ID7381339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp205200 
End bp206522 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content53% 
IMG OID643648851 
Producttwo component sensor kinase 
Protein accessionYP_002547088 
Protein GI222106297 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGGA ATCTCCGTGC GGTACCAAGA ACCCTTCGTG GCCAAATCAC CGTTATCATT 
CTCTTGGCAT TGGTCACCGT CATCGCGACC GGCAGGGCAT TGGAAAATGT TGCGCAGAAT
GATTACGCCA TTCCCAATCT GGAAAGCACC GCCACACAGG TCAGGACCCT CGCCCTTCTT
TTGGCACAGG CCTCTCCTGA AGAACGCACC TCCATTCTAA CCAATGCGCA ACGCGCAGGC
TTGGAGGTTT CGCTTCAACC GATATCGCTG GCTGACAAGT TCAAGACCTC CCCGGAGTTC
CAGGGCTTTG CCGAGACATT GGTCGATTTT CTGTTTCCGC CTGATGGAGA GCCGCCCCTT
GGCGGCTGGC GCGCTTTTTT GGATGGCCGT CGTGTGTTTG CCGAGAAAGT GGATGACCGG
ACAATGCTTG TATTTTTCGG TCTTCCCGAT ACGATTCTGA CGACTTCGTT TCTCAGTCAA
ACGACATATT ACTTTATCGC CGTGGTCGTC TTGATCGCTT TTTTCTTTGC CTTTGCGATC
AGGGCGGTAA CCGAACCGAT CAAGAGAATA TCCGAGGCTG CAATAAAATC GGATATCAAC
AATAGCTCCC AGATCTTCGA AGAACGCGGC ACGGTTGAGA TCCTGTCGCT GGCCCGTGCC
CTAAACGGTA TGCGAAACCG TATTCGCATC ATGGTGGACG GCCGGACCCG AATGCTGCGG
GGGATTAGCC ATGATGTTCG CACTCCCTTG ACGCGGCTCA GATTGCGCTC GGAGCGCATG
GAGGCCGGTG CCTTGCGGGA AGCCCTGCTG ACGGATATCG ATCATATCGA TGATCTTCTG
ACCGAAAGCC TGAACTATCT CCGGGACGAT TTTGCAACCG AGGGCATTGA ACGCGTTGAT
GTTGCGAGCA TCCTGCAAAC CGTTTGCAGT GACTTTTCAG ACATAGGCTT CGATGTCGAA
TATCAGGGGC CGAACAAGCT GATCGCCAAC TGCCGACCGC TCTCAATCAT GCGGGCAGTC
ACCAACCTTT GCGACAATGC AACCAAGTTT GGAAAGACCA TCCTCGTCAA ACTACAGGTC
AGTGGAACGG TTTTTTCGAT CTTGGTGATC GATGACGGAC CAGGCATTCC CAAAGATCTC
AGAGAAAAAG TTTTCGAACC GTTTTTCAAA GGAGATGCTT CCCGCAGCAA ACGCGCCGGT
TTTGGCCTCG GCCTGTCGAT TGTCGCAGAT ATAGCACATG CCCATCAGAG CAAAATTACC
CTGCTGTCCA ATCACCCGAC GGGCCTTATT GTACGGATCG ACATACCACA GCTCGCGCTT
TAG
 
Protein sequence
MFRNLRAVPR TLRGQITVII LLALVTVIAT GRALENVAQN DYAIPNLEST ATQVRTLALL 
LAQASPEERT SILTNAQRAG LEVSLQPISL ADKFKTSPEF QGFAETLVDF LFPPDGEPPL
GGWRAFLDGR RVFAEKVDDR TMLVFFGLPD TILTTSFLSQ TTYYFIAVVV LIAFFFAFAI
RAVTEPIKRI SEAAIKSDIN NSSQIFEERG TVEILSLARA LNGMRNRIRI MVDGRTRMLR
GISHDVRTPL TRLRLRSERM EAGALREALL TDIDHIDDLL TESLNYLRDD FATEGIERVD
VASILQTVCS DFSDIGFDVE YQGPNKLIAN CRPLSIMRAV TNLCDNATKF GKTILVKLQV
SGTVFSILVI DDGPGIPKDL REKVFEPFFK GDASRSKRAG FGLGLSIVAD IAHAHQSKIT
LLSNHPTGLI VRIDIPQLAL