| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5206 |
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| Symbol | |
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| ID | 7381337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 203068 |
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| End bp | 204003 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648849 |
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| Product | ABC transporter substrate binding protein |
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| Protein accession | YP_002547086 |
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| Protein GI | 222106295 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.587678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCATG CCACGCGGCG GATAAGCCGG GCTCTTGCCG CCTTGATGCT CTTACTGCAA
GCGATTTCGC CAGTCTTGGC CGAACCCTTC GATCTGTCGC CGCAGCAGCC GGGCCGCCTG
CATGTAGAAC GGGATGCAAA GGCCGTAGCC GCTCTTCCGG CGAATTATAA ATTCGTCTCC
CCTGGAACCT TGACGGTTGC CGTTGCAGTT GGTTCGCCGC CGATTGCGGC CTATGCAACC
GACGCCAGCA CGGTGGTTGG CTTCGATCCA GATCTTGCCC TTCTGTTGGC GGAAAGCCTT
GGTCTGAAGC TGGACCTTGT TTCGGTCGCC TGGGCGGATT GGCCGCTGGG ACTAGCGTCT
GGCAAATATG ATGCGGTTAT CTCCAATGTC GGTGTCACCG AGCAGCGCAA ACAGAAATTC
GACTTCTCCA CCTACCGGTA CGGGTTGCAT GGCTTTTACG TCAAGAACGA CAGCCCGATC
ACAGCGCTGA AAGAGCAGAA GGATGTTGCC GGTTTGCGGA TCATCGTCGC CTCCGGCACG
ATCCAGGAGC GCATTCTTCT GGAATGGGAC AAGCAGAACA GGGCAAACGG TTTGAAACCG
CTGGAACTGC AATATTACGA TGACGAGGCT GCCGCCGATC TGGCACTGCA ATCGGGCCGG
GCCGATGCCA ATTTCGGACC CAATGCCATG CAGGCCTGGC AGGCGGCAAC GCTGCACCGC
AAGCGGCTGG TAGGCACCGT CAATGCTGGC TGGCCGTTGA CAGCAGATGT CGGCGTAACC
ACCCGCAAGG GCAGCGGTCT GGCGGAACCG ATCGCCGTTG CCATCAACGA CTTGATTGCT
GGCGGGACAT ATCAGGCAGC ATTGTCGCGC TGGGGTCTTT CCCAGGAAGG ACTGACGCAA
TCGCAGGTCA ATCCGCCTGG CCTGCCAAGC TATTGA
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| Protein sequence | MNHATRRISR ALAALMLLLQ AISPVLAEPF DLSPQQPGRL HVERDAKAVA ALPANYKFVS
PGTLTVAVAV GSPPIAAYAT DASTVVGFDP DLALLLAESL GLKLDLVSVA WADWPLGLAS
GKYDAVISNV GVTEQRKQKF DFSTYRYGLH GFYVKNDSPI TALKEQKDVA GLRIIVASGT
IQERILLEWD KQNRANGLKP LELQYYDDEA AADLALQSGR ADANFGPNAM QAWQAATLHR
KRLVGTVNAG WPLTADVGVT TRKGSGLAEP IAVAINDLIA GGTYQAALSR WGLSQEGLTQ
SQVNPPGLPS Y
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