| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5205 |
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| Symbol | |
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| ID | 7381336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 202072 |
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| End bp | 203010 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648848 |
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| Product | ABC transporter substrate binding protein |
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| Protein accession | YP_002547085 |
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| Protein GI | 222106294 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTTC GGAAAATCCT GCCGGGCCTG GCACTGGCGG CATTCACGGC ATTTGCGGCA
AACAGCGCCT TTGCCGCCGA TAAATTCGAT CTGAGCCCTG ACATATCGAA CCGGGTGCGG
GCCGAGAAAA ATCAGGCGGC GATTGCAGCG ATCAAGCCCG GGTTCAAATT CACCACACCA
GGCAAATTCA CGGTGGCTGT CAGCCCTTTC GATCCGCCGG TCGTCACGTA TGCTTCCGAT
GCCAAAACGA TCCTTGGGGC TGACCCGGAT CTTGCCCAAT TGCTGGCGGA TTCGTTGGGA
TTAGAGCTTG AAATTGTCCC GGTCGCCTGG GCGGATTGGC CGCTCGGCAT CGCTTCTGGC
AAATATGATG CTGTCATCAG CAACGTCACC GTGACGGAGC AGCGCAAGGA GAAATATGAT
TTTTCCACCT ATCGTCGTGA CTTGCTGGGC TTTTACGTCG CGAAGAACAG CCCGATTACC
GACATCAAGG AGCCGAAGGA TGTCGCGGGC CTGAAGCTGA TTACCTCATC CGGCACCAAC
CAGGAAAAAA TCATTCTGGA CTGGGATCGC CAGAATGTCG CCGCCGGTCT GAAGCCAATC
GAGGTGCAAT ATTACGAGGA TAGCGCCGCG AGCGATCTGG CGCTCCAGTC GGGACGTGCC
GATGTGCGGT TCAACACCAA TGCCAGCCAG GCCTACGGTT CGCTGATCAA GGGCAACACG
CGGCTGGTCG GCAATGTCAA TGGCGGCTGG CCGTTGACGG CGGATATCGC CACCGTGACC
CGCAAGGATG CGGGACTTGC CGATGCCTTG ACCATTGCCA CAAACGCTCT GATCAAAGAC
GGCAAATACG CCGAAGTTTT GAAGCGCTGG AACCTGACGG CGGAAGCCAT TCCGGAAAGC
CGCACCAACC CGCCTGGCCT GCCGAAGAGC GGTTCGTAA
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| Protein sequence | MTFRKILPGL ALAAFTAFAA NSAFAADKFD LSPDISNRVR AEKNQAAIAA IKPGFKFTTP
GKFTVAVSPF DPPVVTYASD AKTILGADPD LAQLLADSLG LELEIVPVAW ADWPLGIASG
KYDAVISNVT VTEQRKEKYD FSTYRRDLLG FYVAKNSPIT DIKEPKDVAG LKLITSSGTN
QEKIILDWDR QNVAAGLKPI EVQYYEDSAA SDLALQSGRA DVRFNTNASQ AYGSLIKGNT
RLVGNVNGGW PLTADIATVT RKDAGLADAL TIATNALIKD GKYAEVLKRW NLTAEAIPES
RTNPPGLPKS GS
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