| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5196 |
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| Symbol | |
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| ID | 7381331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 195955 |
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| End bp | 196950 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643648844 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547081 |
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| Protein GI | 222106290 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTATG CCCTTAGCCT GCTTGACAAA AGCCCGGTCG AACCGGGTGC TGTTGCCGCC
GATGCCTTGA AAGCCACGGT CGCTCTTGCC TTGCGCGCCG AAGACCTTGG CTATCGGCGC
TTCTGGCTTG CGGAACATCA CAACCTGCCG GCGCTTGCCA GTTCGGCGCC AGAGGCGCTG
ATTGCCTATC TCCTTGCCAG GACGTCGCGG CTCAGAATCG GTTCCGGCGG CATCATGCTT
CAGCATTACA GCGCCTATAA GGTTGCAGAA ACCTTCAACC TGCTGGCAGC GCTGGCGCCG
GGCCGGGTTG ATCTGGGTGT CGGCAAGGCA CCGGGTGGAT TTCCCTACGC CACCCATGCC
CTGCAAGCCG GTCGGAAAGC GGCTGCCCCT GCCGATTTCG AGGAACAGCT TGAGGATTTG
AACCGCTATC TGCTGACGGA TGCCGCTGCT GCCAATGCCT TGCTGGCAAC GCCGGTGCCG
CCCGTTCCGG CAGAGCGTTT CCTGCTTGGT GCCAGTGTCG CGAGCGCAAA GCTGGCGGCG
GCAAAAGGCT GGACGCTGGT TTTCGCGGGC CATTTGAATG GTGACCAGCA TAATCTGCAG
GAGACCTTTG ATGTTTACCG TCGTGAAACC GGTGGCAAAG TTCCCGTTCT GGCTCTGGCC
GCTTTGGCGA CCGACGCGGA AGAGACGGCG AGAAGCCTCG TGGCTGACAT CAAGATCTTC
AAGGTGATTC TGGCCAATGG TCAAAGCGTC AATGTCGGTA ATGCCGAACA GGCCGCCGAG
TTTGCTCGTC AGTCCGGTGT GTCGGATTAC CGGGTTGAAG AAAAGACCCC GCATGTTCTG
GCAGGCACGG GCGAGCAAGT CCGCAAGGAG CTCGATGCCC TTCATGCCAC GCTTGGAGTG
AGCGAATTCA TCATCGACAT CCCCGTTCCG CAGTCGGCTC TTCGGCTGAA TGCCATTGAG
TTGATTGCTG GTTCGCGCCT GTCTCTTGCC GCCTGA
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| Protein sequence | MSYALSLLDK SPVEPGAVAA DALKATVALA LRAEDLGYRR FWLAEHHNLP ALASSAPEAL
IAYLLARTSR LRIGSGGIML QHYSAYKVAE TFNLLAALAP GRVDLGVGKA PGGFPYATHA
LQAGRKAAAP ADFEEQLEDL NRYLLTDAAA ANALLATPVP PVPAERFLLG ASVASAKLAA
AKGWTLVFAG HLNGDQHNLQ ETFDVYRRET GGKVPVLALA ALATDAEETA RSLVADIKIF
KVILANGQSV NVGNAEQAAE FARQSGVSDY RVEEKTPHVL AGTGEQVRKE LDALHATLGV
SEFIIDIPVP QSALRLNAIE LIAGSRLSLA A
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