| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5183 |
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| Symbol | |
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| ID | 7380980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 177982 |
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| End bp | 178992 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648833 |
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| Product | ABC transporter membrane spanning protein (oligopeptide) |
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| Protein accession | YP_002547070 |
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| Protein GI | 222106279 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAACG CCTACTTGAC ATATGCTGCA AAACGACTGG CCCAAGCTTT TGTGGTCATC
CTGATGGCCT ATGTCTTTAC ATTCGTGGTG GTCAGCATTC TGCCGGGCGA CCCGGTCACC
TCCGTCCTGC GTGATCCGCA AAACGGCTTC ACCGAGGCGG AGATTGCCGA GATCATCGCC
GCCCAGGGAT TGGACAAGCC GATTTCGGTC CAATTGTGGA CGTCACTCTC TCACTTCGTC
ACCGGCGATT TCGGCCTGTC GATGCGCTCC AGCCGCCCGG TGGCGGCGCT GATTGCCGAA
GTCCTGCCCT CAACGCTGAT CCTTGCATCG ACGGCCCTTG CCTTCGCGCT TGCCCTGGCG
CTGGTGATTG CCTACGGCAC GCAGTTTCTG CCAAAACGGT TCGGACAGGG CCTGCTGCGG
GGTTTTCCCT CCCTGTTCCT ATCGGTCCCG AATTTCGTCA TCGGGCTGGC CCTGATCCAT
ATTTTCGGCT TCCAGCTGGG CGTTTTCCGG GTCATTGAAC CGGATAGTGT CTGGGCAACC
CTGTTTGCGT CAATTGCACT CGGCATTCCC GTCTCCGCCC AGATAGCGGA AGTCCTGATT
GCCAACCTCG ACCATGAAGC AAGCCAGGAC TATGCCACTG TAGCGCGGGG TCGAGGTCTT
TCCCAGGCGC AGATGTTTTT CAAACACCTG TTGAAGCCCT CATCATTGCC GGTGGTCACA
GTGATCGCCC TGACCGTCGG CGAGTTGCTG GGTGGTTCGC TGATAACCGA AACGGTTTTT
GGGCGAACGG GCATCGGCAG CCTGGTGCAG CGCTCGGTCA CAACACAGGA TCTGCCTGTT
CTTCAGGCGG TCGTATCGCT GGCAGCAGTG GCCTTCGTTC TCGTCAACCT GATCGCAGAC
CTCGTCTATC CCCTGCTTGA CCCGCGTGTG AAACTGCTTG GCGTCCAACG GCCTCGCACG
TCCGCTGAGG ACACAAGCTC TACCGAAACC TCCCGTGCGG TGACGATATG A
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| Protein sequence | MRNAYLTYAA KRLAQAFVVI LMAYVFTFVV VSILPGDPVT SVLRDPQNGF TEAEIAEIIA
AQGLDKPISV QLWTSLSHFV TGDFGLSMRS SRPVAALIAE VLPSTLILAS TALAFALALA
LVIAYGTQFL PKRFGQGLLR GFPSLFLSVP NFVIGLALIH IFGFQLGVFR VIEPDSVWAT
LFASIALGIP VSAQIAEVLI ANLDHEASQD YATVARGRGL SQAQMFFKHL LKPSSLPVVT
VIALTVGELL GGSLITETVF GRTGIGSLVQ RSVTTQDLPV LQAVVSLAAV AFVLVNLIAD
LVYPLLDPRV KLLGVQRPRT SAEDTSSTET SRAVTI
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