| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5182 |
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| Symbol | dppC |
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| ID | 7380979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 177137 |
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| End bp | 177985 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643648832 |
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| Product | ABC transporter membrane spanning protein (dipeptide) |
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| Protein accession | YP_002547069 |
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| Protein GI | 222106278 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCG CTTTTTCCTC CTCGAATGGT GGTTTGCAGG CAGCCAAAAA ATGGTCGGCA
GTCCACATGC CGCCAACGGT GTTCATCTCA TTTGCCATCA TTGCCCTGGT GATCGCCTGG
GCGCTCGCCC CCGGCTTGTT CACAAGCCAT AGCCCCGTCA TCGGCGTTCC CGCTCAAAAA
CTGCTGGCAC CCAGCGCACA GCATTGGTTC GGCACAGACC AGCTCGGGCG CGACCTTTAC
GCGCGCGTCG TCTATGGCAC GGCGTCTTCG GTGACCAGTG CGCTGATCGC GGTTGTCATT
GGCGTTATCG TCGGTGGCCT CATTGGCCTT CTGGCCGGCT TTCTCGGTGG CTGGGTCGAT
ATCGTGCTGG CGCGCCTGGT CGATATGCTG CTGGCGATCC CCAGCTTCCT GCTGGCGATT
ATCGTCGTCA CCGCACTCGG CTTCACCACC ACCAATGCCG CCATCGCGAC CGGCGTCTCC
GCCGTGGCGG TCTTTGCCCG GGTGATGCGG GCAGAGGTGA TCAAAACCCG GCAAGCGACC
TTCGTCGAGG CGTCGTTTCT GCTGGGAGGG TCACGTTGGT ATATCCTTCT TTGGCACGTG
CTCCCAAATG CTTCACGCTC CCTTCTCACC CTCGCCGTCC TGCAATTTGG TCTTTCCATT
CTGGTGATCG CCGGTCTTGC CTTCCTCGGC TACGGCGATC CGCCACCCGC CTCGGACTGG
GGTCTGCTGA TTTCAATCGG CAAGGATTAT CTCAAATGGC CGTGGCTGGT TTACGCGCCT
GCGTTCGCCG TGATCGCAAC CGTCCTCTCC GTCAACAGGA TCAGCCGATG GCTCCGCAAG
ACAGACTGA
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| Protein sequence | MTIAFSSSNG GLQAAKKWSA VHMPPTVFIS FAIIALVIAW ALAPGLFTSH SPVIGVPAQK
LLAPSAQHWF GTDQLGRDLY ARVVYGTASS VTSALIAVVI GVIVGGLIGL LAGFLGGWVD
IVLARLVDML LAIPSFLLAI IVVTALGFTT TNAAIATGVS AVAVFARVMR AEVIKTRQAT
FVEASFLLGG SRWYILLWHV LPNASRSLLT LAVLQFGLSI LVIAGLAFLG YGDPPPASDW
GLLISIGKDY LKWPWLVYAP AFAVIATVLS VNRISRWLRK TD
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