| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5180 |
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| Symbol | |
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| ID | 7380977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 174340 |
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| End bp | 175425 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643648830 |
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| Product | monooxygenase |
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| Protein accession | YP_002547067 |
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| Protein GI | 222106276 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTAA TCGCGCAAAG CAAGACGTCG GCGCAGCCCT TCCGCACAAA GCATCGGCTT
GGCTTTAATA CCCGCGTGTC TTTCAACGAT ATCGACGGAC CGGCACACGG TTTGCGCGAG
GGAATTGAAC TCTATCAGAT TGCCGAGCAA CTCGGCTATC AATCGGGCTG GGCCTACCAG
CGGCACTTCG ATCATTACCT GTCTTCCCCG TTGCCCTTCT TTGCGGCAGC CGGTCAACAC
ACCAAGCGCA TCACATTGGG GTCGGCGGTC ATCCCGATGC GCTATCAGGA CCCTATCCTG
CTGGCAGAGG CCGCAGGAAC CACTGACCTG CTGGTCGGCG GACGGCTGGA ACTGGCCATT
TCGACGGGTG CGAACGCCAC ATTCGACGCA ATCTTCGGGA CAAGTGACAC GGACGCCCGT
ACTGAGGCAA AACGGCGACA AGCCCGGTTT CTGGCAGCCA TTGCCGGCGA CGTCCTTCAT
ACGGTGGACG GCCCCGGACA AGGCGCGCCA GAGGGTACCG AACTTCGAGT GACGCCGCAT
AGCCCAACCC TACGCTCACG GATCAGGCAG GGCGCGGCAA GCCTTGCCTC TGCCGTGCAG
GCCGCAGAAC TTGGCATTGG GCTGATCACC GGCACCGTCC AGCATGACCA AGCTGAAGGC
GAAAGTTTCG GCGCATACCA GGCGCGTATC ATCGAAGCTT ACCGCACGAC ATGGCGCAAG
ACGTGGTCAA CCGAGCCACC CCCGGTCGCA GCCGCAGCCT CTATTCTGGT TGGAACGACA
TCCGAACTGA GAGAGAAATA TGCAGCCTAC GATCTGGAAC GCCGAACCCA GGGCATCGCG
GCATCAAGGC CCAAGGGCGC CCTGCAACCC GCTTTCCGGC AACCATCGGG AAGCCAGATC
TCGCCTGTCT TTCAGGGAAC ACCCGATCAG GTCACCGAGG CGGTCTTCAA CGATCCGGGC
CTTGCCAGCG CCGATGAAGT CATCCTGTTT CTGCCGCCTG CCTTCGGTCT TGCGGAAAAT
GTCAGGCTTT TGACCGATCT TGCCCAGACG GTCGCGCCGA ATTTTGGCTG GCGACCAGAC
CAATGA
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| Protein sequence | MTVIAQSKTS AQPFRTKHRL GFNTRVSFND IDGPAHGLRE GIELYQIAEQ LGYQSGWAYQ
RHFDHYLSSP LPFFAAAGQH TKRITLGSAV IPMRYQDPIL LAEAAGTTDL LVGGRLELAI
STGANATFDA IFGTSDTDAR TEAKRRQARF LAAIAGDVLH TVDGPGQGAP EGTELRVTPH
SPTLRSRIRQ GAASLASAVQ AAELGIGLIT GTVQHDQAEG ESFGAYQARI IEAYRTTWRK
TWSTEPPPVA AAASILVGTT SELREKYAAY DLERRTQGIA ASRPKGALQP AFRQPSGSQI
SPVFQGTPDQ VTEAVFNDPG LASADEVILF LPPAFGLAEN VRLLTDLAQT VAPNFGWRPD
Q
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