| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5179 |
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| Symbol | ssuD |
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| ID | 7380976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 173070 |
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| End bp | 174173 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648829 |
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| Product | sulfonate monooxygenase |
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| Protein accession | YP_002547066 |
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| Protein GI | 222106275 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.777394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCCG AATTCATTAG CGCAAGTTTC GCCAACGGAT CGAATGATCT TCGCCCCATC
CCCGATGCGC CGGTGGACCC CGATTTCCTG CAACGCTACG CACGTGCGCT GGACGATTAC
GGTTTCAACT ACACACTGAT CCCCTATTCT TCCGCTTCCT TTGATCCTTT CACGCTGGGT
GCGACCATTC TGGCCCATAC CAAGCAAATC AAGATCATTG TCGCCCTGCG CCCGAACACC
ATCTACCCGA CCGTTGCGGC GAAATCGCTG GCAACACTGG ACCAGTTGAG CGGCGGCCGT
GTTGTCGTCC ATTTCATCGC CGGCGGCAGT GATGAGGAGC AGGCCCGCGA GGGTGATTTT
CTGACCAAGG AGCAACGCTA CGAGCGTCAG GAAGAATATA TCCGCATTCT GCGTCTGGCC
TGGACCTCGA CAGAACCCTT CGATTTCGAT GGGAAATACT ACCAGTTCAA ACAGTTCCGC
AGTGCCGTGC GCCCGACCAA CGGCCTGATC CCGATCTCGC TGGGTGGCTC GTCGGATGCG
GCCTATCGGA TCGGCGGCTC GTTATGCGAT ATTTTTGGCC TTTGGGGCGA GCCTTTGGCA
GAAACCAAAC AACAGATCGA CCGCATCTAT GCCGAGGCGG CCAAGGCCGG ACGCAAGGAT
CGTCCGCGAA TCTGGGTCAC ATTCCGTCCG ATCATTGCCG AAACGGACGA ACTGGCCTGG
CAGAAAGCGC ATCGCATTCT CGACACGCTG AACGAAAATC GTGAGAAAGG CCTTAGCAGA
ACACCCTTGT CCGCGCCTCC TCCAGCCAAT GTCGGCTCAC AGCGTCTTCT GGATATTGCC
AAACGCGGCG ATGTTCACGA CAGGGCTCTC TGGTATCCGA CAGTGACGGC GACAAACGCC
AGCGGCGCAA CCACCGCTTT GGTCGGTTCG CCTCGCACCA TCGCCGATTC CATACTTGAT
TATATCGACC TCGGCGCCGA TCTGATCTCG ATCCGTGGGT ACGACAACTA CAATGATGCC
GTGGATTATG GTCGCTATGT CCTACCGCTG GTCCGCGAAG GCATCCGTGA ACGCGAAGAG
AACAAGAAGA AGGCCGCTGC CTGA
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| Protein sequence | MAAEFISASF ANGSNDLRPI PDAPVDPDFL QRYARALDDY GFNYTLIPYS SASFDPFTLG
ATILAHTKQI KIIVALRPNT IYPTVAAKSL ATLDQLSGGR VVVHFIAGGS DEEQAREGDF
LTKEQRYERQ EEYIRILRLA WTSTEPFDFD GKYYQFKQFR SAVRPTNGLI PISLGGSSDA
AYRIGGSLCD IFGLWGEPLA ETKQQIDRIY AEAAKAGRKD RPRIWVTFRP IIAETDELAW
QKAHRILDTL NENREKGLSR TPLSAPPPAN VGSQRLLDIA KRGDVHDRAL WYPTVTATNA
SGATTALVGS PRTIADSILD YIDLGADLIS IRGYDNYNDA VDYGRYVLPL VREGIREREE
NKKKAAA
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