| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5173 |
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| Symbol | |
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| ID | 7380971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 167250 |
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| End bp | 168035 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643648824 |
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| Product | ABC transporter nucleotide binding/ATPase protein (amino acid) |
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| Protein accession | YP_002547061 |
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| Protein GI | 222106270 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.569594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCAA ATACCGACAA TGCCATCGTC CGTTTGGAAG ACGTGCACCT GTCCTTCGGC
CAGACGCAGG TGCTGAAGGG CATCGACCTG ACGGTCAACA AGGGCGATGC CGTGTCGATC
ATCGGTCCCT CCGGCTCGGG CAAATCCACC ATCCTGCGCT GCATCAACGC GCTGGTGACG
GCCCAAAGCG GTCGCATCAC CGTGGCGGGG ACCCGCGTGG ACCAGTTGAC CAAGGAAAGC
GAACGTATCG CGCTGCGCAA GCGGGTCGGC ATCGTCTTCC AGCAATATAA TCTCTTTCCG
CACCTGACGG TGCTCGACAA TATCATGCTT GCCCCGACCC GCATTCTGGG GACGGCAAGA
CGCGAAGCGG AAAAGGTTGC GCGCGAATTG CTGGACAAGG TGCGGCTTGG CGAAAAGGCC
GATGCCTATC CCGGCCAGCT CTCCGGCGGG CAGCAGCAGC GCGTGGCGAT TGCCCGGGCG
CTGGCGATGA AACCCGATCT CGTGCTGTTT GACGAGGTCA CATCGGCGCT CGATCCTGAA
ACCGTCGGCG AGGTTTTGTG GGTGATCCGT GACCTGATCC GCGAGGGTAT GACCAGCATT
CTCGTCACCC ATGAAATGCG CTTTGCCGAA GAGATCAGCG ACACCGTGGT ATTTACCGAG
AATGGCCGCA TCGTTGGCCA AGGCTCGCCT GAGCAGATCT TCCATAAAAG CGACAATGCG
CGCATCCGCC AGTTCGTCGG CGGGTTGTCG GGCCGGGGTA CGGTGCGCGA AGGCGAAGGC
ATATAG
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| Protein sequence | MIANTDNAIV RLEDVHLSFG QTQVLKGIDL TVNKGDAVSI IGPSGSGKST ILRCINALVT
AQSGRITVAG TRVDQLTKES ERIALRKRVG IVFQQYNLFP HLTVLDNIML APTRILGTAR
REAEKVAREL LDKVRLGEKA DAYPGQLSGG QQQRVAIARA LAMKPDLVLF DEVTSALDPE
TVGEVLWVIR DLIREGMTSI LVTHEMRFAE EISDTVVFTE NGRIVGQGSP EQIFHKSDNA
RIRQFVGGLS GRGTVREGEG I
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