| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5161 |
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| Symbol | rbsA |
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| ID | 7380961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 155147 |
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| End bp | 156628 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648814 |
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| Product | ABC transporter nucleotide binding/ATPase protein (ribose) |
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| Protein accession | YP_002547051 |
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| Protein GI | 222106260 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCTTC TCGATGTCCA AACCATCTCG CGCTCCTTCG GCTCCACCAG AGCCTTGATT
GATGCATCTC TGGTGATCGA GCCGGGCGAA ATTGTTGCCC TGATGGGCGC AAACGGGGCT
GGGAAATCCA CGCTGGTGAA AATTCTCTCA GGCGTGCAAT CGGCGGATTC CGGCAGTATT
TTGCTAAAAG GCCAGCCTTT TGCCCCGCAA AGCCCGGCAG AAGCCGCCAA ATTTGGTGTG
GTGACGGTTC ACCAATCCAC GGATGTGGTG GGCATTCCGG GCTTGAGCGT GGCCGATGCG
CTGCTGCTCA ATCACTATAT CGATGGCCGT CAGCCGTTTT TTCTATCAAC CAAAAGCGTG
CGGCGTGAGG CAGCGCGCAT TTTGAGTGAC GCGGGTTTTA ACCTGCCTTT GGACCGCGAT
TTTGCTGATC TTGGGGCGGC CGATCGGCAA ATGGTGGCCA TTGCCCGTGC GCTTGCCAAT
AAGGCCGAAT TGTTGATTTT GGACGAGCCA ACGGCCAGCC TCTCAACGCA GGAAGCGGAA
CGCCTCTATG CCATTTTGTT GGGCTTGAAA GCCCGTGGCA TAGCCATTCT CTATATCTCG
CATCGCACGG CCGATCTGGC AGCCCTTGCC GACCGCGTGG TTATTCTGCG AGGCGGGCGC
AATGTCGGGG CGCTCCGTCG TCCGATTGAT TTCGATGCAG CCCTTGAGAC CATGATTGGC
CGCGCATTGA ACATCGCGCG CCCGGATCGG CGCACAGAAT TTGGCAAAAC CGTGCTGGAT
TTGCGTGGCA TTCGACTGCT GAACAGCAGC AAACCCTTTG ATCTTACGGT GCGCGAGGGT
GAAGTGGTGG CCATAACAGG CGTGCTGGGC GCGGGCAAAA GCAGGCTGCT ATCAGCATTG
TTTGGAGCGG GCCAATTTGT GGCAGGTGAA GCCGTTCTGG ATGGCAAGCG CTATGCCCCC
AAAAGCCCGG CAGAGGCCAT TGCCTCAGGT GTCGCGCTTG TTGCGGAAGA TCGCCACCGT
TCGGCCCTGA TGCCTGCCGA TTGGCCGGGC GAAAGCGTGG CAGCCACCAT CAGCCTGCCG
CATCTCAAGC GCTGGTATCC TTCGGGTTTT CTGGCGTCGG ATGCTGAACG GGTGAAGGCA
AAGGCTGCCA TTTCCCGGCT TGGAATCAAA GCGGCGGGGC CTGATGCTTC CGTCTGGTCG
CTGTCTGGTG GCAACCAGCA AAAGACGGTG ATTGCCCGCT GGGAAGTGGA GCAAAGCCGC
CTGTTGTTGC TGGATGAGCC ATTTCAGGGC GTCGATGTCG GGGCCCGGCA AGATATTATC
ACCACCATTC GCAGCCACGC GGATCGCGCA ACCCTGATAG CCACCTCGGA TTTTGAGGAA
GCACAGGAGG TGGCCGACCG CATTTTGCTG ATTGATCAAC ACACGCTGAT TGAGCTGACG
CCAACGGCTG CATCAGCCCA TCACCACAAG GAAATCGCCT GA
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| Protein sequence | MPLLDVQTIS RSFGSTRALI DASLVIEPGE IVALMGANGA GKSTLVKILS GVQSADSGSI
LLKGQPFAPQ SPAEAAKFGV VTVHQSTDVV GIPGLSVADA LLLNHYIDGR QPFFLSTKSV
RREAARILSD AGFNLPLDRD FADLGAADRQ MVAIARALAN KAELLILDEP TASLSTQEAE
RLYAILLGLK ARGIAILYIS HRTADLAALA DRVVILRGGR NVGALRRPID FDAALETMIG
RALNIARPDR RTEFGKTVLD LRGIRLLNSS KPFDLTVREG EVVAITGVLG AGKSRLLSAL
FGAGQFVAGE AVLDGKRYAP KSPAEAIASG VALVAEDRHR SALMPADWPG ESVAATISLP
HLKRWYPSGF LASDAERVKA KAAISRLGIK AAGPDASVWS LSGGNQQKTV IARWEVEQSR
LLLLDEPFQG VDVGARQDII TTIRSHADRA TLIATSDFEE AQEVADRILL IDQHTLIELT
PTAASAHHHK EIA
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