| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5108 |
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| Symbol | |
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| ID | 7380914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 96470 |
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| End bp | 98164 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648767 |
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| Product | two-component sensor |
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| Protein accession | YP_002547004 |
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| Protein GI | 222106213 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.775404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGACT TTCGCAACGT GATGAAGACT GCCTTTCGTA TCAAGGCGCC GGTGCGTAGT
GGTCGTGCGG ATGAAGAGTT TGATACGGAG AAGGCGCAGG CGCTGGTTCG TATTATTATT
GTCACCGGGG CAATCAGTTA CGTTCTGCCA GCGATAATAA TCGGAGCGAC ACCGGTCGAG
GCATGGAGCG TAGTGCCTCT TCTCAGCTAT TATTTTCTGT TTTCTCTTGC TGCATACTGG
TGGATAGCAC GTTGGCCCGG CGAAAACAGA GTGCGCCGTG CCATTACCAT TACCCATGAC
CTTGGTGCTC TGACCTTTAC CATTGCCGTT GGAGGTCAAA CGTTTCTGCC GCTGTTTGCA
ATCATGTTGT GGGTGACAGT CGGCAACGGT CTGCGCTTTG GACCAGCATA TCTCAAAATT
TCAACGGCAG CCACGCTCGC CGGGATTGCC ATTATCACCT ACTTCAATGC CTATTGGCGC
GAAAATCCCT TCATGGTCCT GACATTGGTG GCCACGACCG TCCTCGTACC CGCCTATATC
TATGCTTTGC TTGGACGATT GCGCAAAGCC TATGAAATTG CCCAGGAGGC CAGCTTGTCG
AAATCGCGGT TCCTGGCGCA AGCGAGCCAT GACCTTCGGC AACCGATCCA TGCCATCAGT
TTGTTCACTG CTTGTCTGCG CGATGCCAAC CTGCAGCCGA AAGAACTGCA AATGGTTGAA
AATATCGACC GATCGCTCCA GAGCGTATCG CGCCTGTTCA AGTCGCTGCT GGATATTTCG
ACCCTGGATA GTGGTAGGGT TACTCCGAAA TATGAGAGGA TTGCAATTGC CGAAGTGATC
GATGACGTGT TGCGTCAGAA CCGGGAAGCG GCGCAGCAGA GCGGCATTAC ATTGCGGACG
GTCAGTTGCA GCGCGGTTGT GGAGATAGAC AGGGCTCTTT TGACCACCAT GGTGCAAAAC
ATCGTCAACA ATGCCATCAA ATATGCGGCG GGACGCGATG TCGTCATTGG CTGCCGGCAT
CGTGGTGGCC GGCTGGCCGT CCAGATCTGC GATCAAGGAC CCGGTATTCC CCGGGACCAT
CAAGTGAGGG TGTTTGAGGA ATTCTATCAG GTGCGTGAGC GTGGCGACAA GGACATTGAT
GGGGTTGGCC TTGGTCTTCC GATCGTGCGG CGTCTCGGTC GCCTGCTCGA CATTGATGTG
GATTTGAAGT CGGATCCAGG CAAGGGAACC AGCGTCACGC TCGGCAACTT GCATGTTACG
CACAAACAAG AATGGTCGCA GTCGCCCCTG GCGGCGGGAC ACTATCCGGC GGCCATTGAC
GGGCTGCGCA TATTGCTCGT TGAAGACGAC GAGGCCGTAT TGATCGCCAC GGCAAGCCTG
CTGCGAAAAT GGGGATGCCA CGTCCAGGCC GAGGCGACAA TACCCAGGCA TGTGGGGGAT
TTTGACCTGT TGATCACCGA TTTTGATCTC GGTGGTGGCG TCACCGGCAC GGAATGCATC
CAGATCGTCC AGGACCTGAT TGGCCGGCAG ATGCCCGCAG TGGTGATGAG TGGCCATGAC
GAGGGGCGGG TCAGAGAGGA CCTGGGATCG GCTGATATTC CAATCCTGTC AAAGCCCGTG
CGACCGGCAG AGCTTCGTTC GGTGGTCATG GTCGCGGCGC TGGAGACACG CAGGACGAGA
GAGACGAATT CCTAG
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| Protein sequence | MIDFRNVMKT AFRIKAPVRS GRADEEFDTE KAQALVRIII VTGAISYVLP AIIIGATPVE
AWSVVPLLSY YFLFSLAAYW WIARWPGENR VRRAITITHD LGALTFTIAV GGQTFLPLFA
IMLWVTVGNG LRFGPAYLKI STAATLAGIA IITYFNAYWR ENPFMVLTLV ATTVLVPAYI
YALLGRLRKA YEIAQEASLS KSRFLAQASH DLRQPIHAIS LFTACLRDAN LQPKELQMVE
NIDRSLQSVS RLFKSLLDIS TLDSGRVTPK YERIAIAEVI DDVLRQNREA AQQSGITLRT
VSCSAVVEID RALLTTMVQN IVNNAIKYAA GRDVVIGCRH RGGRLAVQIC DQGPGIPRDH
QVRVFEEFYQ VRERGDKDID GVGLGLPIVR RLGRLLDIDV DLKSDPGKGT SVTLGNLHVT
HKQEWSQSPL AAGHYPAAID GLRILLVEDD EAVLIATASL LRKWGCHVQA EATIPRHVGD
FDLLITDFDL GGGVTGTECI QIVQDLIGRQ MPAVVMSGHD EGRVREDLGS ADIPILSKPV
RPAELRSVVM VAALETRRTR ETNS
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