Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5091 |
Symbol | |
ID | 7380904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 84452 |
End bp | 84943 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643648757 |
Product | hypothetical protein |
Protein accession | YP_002546994 |
Protein GI | 222106203 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTCAC CCTCCACCGA TGCCGGATTG CCAACACCCT ATGAGCGGCT TGCCGCTCTG GGCATTGCGC TGCCGCCATC CCCACCGCCA ATCGCCAATT TCGTCACCCA TGTGCGCGAG GGCAATCTGC TGTTTTTATC CGGTCAGGGA CCGCGTGAGG CCGATGGCTT TCTCTATTCC GGCAAGGTCG GCGATGATGT GACGCCGCAA GATGCCTATC GCCACGCCCG CCTCACTGGC ATCAACCTGA TTGCCGTGAT GCATGATGCC TTGGGCGATC TCGCCCGCGT GCGCAAAATT GTCAAAATGC TCGGCATGGT CAATGCAACG CCGGATTTTC GCGATCATCC GCAGGTGATC AATGGCTGTT CAGACCTGTT CATGGAGGTG TTTGGCCAGG CGGGTCAGCA CGCCCGCTCA GCGGTTGGTT TTGGTTCGCT TCCCGGAAAT ATCACCGTGG AAATCGAAGT GATTGTGGCG TTGCACGAAT GA
|
Protein sequence | MTSPSTDAGL PTPYERLAAL GIALPPSPPP IANFVTHVRE GNLLFLSGQG PREADGFLYS GKVGDDVTPQ DAYRHARLTG INLIAVMHDA LGDLARVRKI VKMLGMVNAT PDFRDHPQVI NGCSDLFMEV FGQAGQHARS AVGFGSLPGN ITVEIEVIVA LHE
|
| |