Gene Avi_5091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5091 
Symbol 
ID7380904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp84452 
End bp84943 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content58% 
IMG OID643648757 
Producthypothetical protein 
Protein accessionYP_002546994 
Protein GI222106203 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCAC CCTCCACCGA TGCCGGATTG CCAACACCCT ATGAGCGGCT TGCCGCTCTG 
GGCATTGCGC TGCCGCCATC CCCACCGCCA ATCGCCAATT TCGTCACCCA TGTGCGCGAG
GGCAATCTGC TGTTTTTATC CGGTCAGGGA CCGCGTGAGG CCGATGGCTT TCTCTATTCC
GGCAAGGTCG GCGATGATGT GACGCCGCAA GATGCCTATC GCCACGCCCG CCTCACTGGC
ATCAACCTGA TTGCCGTGAT GCATGATGCC TTGGGCGATC TCGCCCGCGT GCGCAAAATT
GTCAAAATGC TCGGCATGGT CAATGCAACG CCGGATTTTC GCGATCATCC GCAGGTGATC
AATGGCTGTT CAGACCTGTT CATGGAGGTG TTTGGCCAGG CGGGTCAGCA CGCCCGCTCA
GCGGTTGGTT TTGGTTCGCT TCCCGGAAAT ATCACCGTGG AAATCGAAGT GATTGTGGCG
TTGCACGAAT GA
 
Protein sequence
MTSPSTDAGL PTPYERLAAL GIALPPSPPP IANFVTHVRE GNLLFLSGQG PREADGFLYS 
GKVGDDVTPQ DAYRHARLTG INLIAVMHDA LGDLARVRKI VKMLGMVNAT PDFRDHPQVI
NGCSDLFMEV FGQAGQHARS AVGFGSLPGN ITVEIEVIVA LHE