| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5076 |
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| Symbol | |
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| ID | 7381230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 69066 |
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| End bp | 70604 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643648744 |
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| Product | major facilitator superfamily permease protein |
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| Protein accession | YP_002546981 |
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| Protein GI | 222106190 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.543478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCTC GGATGTGCTT GCCGGCTGAG CGGCCCGATG GGTGGGCGGA TAATCTCTTA
CTGATAGGAA ACAGACAGCC GCAATCGTTG ACAATAAAAC CAGCGCCGAG CCCCGTCTTT
GGAGGAGGGA TCGCCAGGCG TCTGCATTTA AAAAGGGGCA TATGTTCCAT GGAACAGGCG
CAAATTTCTA CTATTTCACC TTTCGAGGGA AATACGCTAA GAGCATATTT CAAAAGTTTG
GTTGGTGCGC CCAGGAAAGC CAGGATGGCT TTGATTGGAT GCCTGATCTT GATGGTTATT
AGTCCTGCCG GTCTTTCGGC TATGACACCT TTTGTGATCG CAGCTTTCTC AGCGGAGACC
CATCGTGCTC AGGCCGATGC GCTGCTGATT TTTGTGGCGC TGCCGTTGCT GCTCTCCCCC
CTGATCCTGC CGCTCGCCGG CGCATGGGTA GATCGGTGGG GTGCAAGAGC CGTTGCTATT
CCCGCAGTCA TTTTATACGC CGTGACAACC GCGATGATCC CGCTGGTCAG CGGAACGATC
TGGATCTTGA CCCCCATGAT CATCCTGGCC GCATTATTCG GCTTCATGTC CAGCCTTGCG
GTGATTTTCA AAATCATCAC ATGCTGGTTT CCGGAGCATC GGGGGATCGG ATTTGCACTG
GTTGGGGTGC TTTCAAGCTT CGCCAATGCG CTCTTTTCTC CCTTGTTCCA GTGGTTGATT
TATGGAGCGA CGAACAGTGA TGGGTCGGCT TCGGGCCTCC ACCAACTGGG CGGCATCGGT
TGGAGCGGCT CCTACTTCGT CGTCGCAGGA ACCATCGCTA TTCTTGGCAT TCCCTCAGCG
CTCTTTCTCA TCTCGGAACC CGCCAAGCCG TCTGCTGCCA AGCGCCTTCC CATGCCTGGG
CCCCACTTGA ATATGGAGAA TGCAGCCGGA ATACCTCTCA AGATGGCGAT CAGGACCAAG
ACCTGGATAT TCATCACGCT TTTTCTGGCG ATCACCGCTG CAGGCCCGAT GACTGTCCGA
CAAAACTCCG TCGATTTCTT TCAGCAGCGT GGCTTTGATC TGAACGACAT CGCATTTTCG
CAATCTGTTT TGTTCGTGGC CTCGGTCGTC GGTCTTTTTC TCGGCGGCAT GATCCTTGAT
CGCAGTCGAC GCCCTTGGGT GATCGCGCCC CTGCTCGCGA TGGTTCCGAT TGGCCTAACC
ATAGCCTATT TCAACCACGG TTCGGTTTTC CTGCTCTATG TGGCAATGAG CTCTCTCGGA
TTTGCGACGG GTGCGGAGTC TGCGCTCGGC CCATTCCTCG TTGCCCGTTA TTTCGGACCC
AAAGCTTTTG CTCAAATTCA AGGTTTGACA CTGGCAATCT GCTCACTGTC CTTCGGCTTG
ACGCCATTCC TTACCAGCGC AATGGCGACT GCAGCTGGAA GCTATTTCGT CCCGTTTGCC
ATCCTGACCG GGCTGACAAT GGTTGCCGTC GCGCTGGGAG CCCTTTTACC CAATTACCCA
CCAGAATGGC CGACCGGGGC GGAAGTCTCT GGAAAGTAA
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| Protein sequence | MPARMCLPAE RPDGWADNLL LIGNRQPQSL TIKPAPSPVF GGGIARRLHL KRGICSMEQA
QISTISPFEG NTLRAYFKSL VGAPRKARMA LIGCLILMVI SPAGLSAMTP FVIAAFSAET
HRAQADALLI FVALPLLLSP LILPLAGAWV DRWGARAVAI PAVILYAVTT AMIPLVSGTI
WILTPMIILA ALFGFMSSLA VIFKIITCWF PEHRGIGFAL VGVLSSFANA LFSPLFQWLI
YGATNSDGSA SGLHQLGGIG WSGSYFVVAG TIAILGIPSA LFLISEPAKP SAAKRLPMPG
PHLNMENAAG IPLKMAIRTK TWIFITLFLA ITAAGPMTVR QNSVDFFQQR GFDLNDIAFS
QSVLFVASVV GLFLGGMILD RSRRPWVIAP LLAMVPIGLT IAYFNHGSVF LLYVAMSSLG
FATGAESALG PFLVARYFGP KAFAQIQGLT LAICSLSFGL TPFLTSAMAT AAGSYFVPFA
ILTGLTMVAV ALGALLPNYP PEWPTGAEVS GK
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