| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5022 |
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| Symbol | |
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| ID | 7381186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 19201 |
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| End bp | 20637 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643648700 |
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| Product | amidohydrolase |
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| Protein accession | YP_002546937 |
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| Protein GI | 222106146 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.174731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTTT CCCCCAATAC ATCCGCCGCG CTTTGGTCGA TTGTCGATAC CAAGACGCCT
GACTTTATCG CCTTGAGCGA CCGGATCTGG GGCATGCCGG AAACCTGTTA TATGGAAGAA
TCGTCCGTTG CCGAGCATGT CGCCATGCTG AAGGCGGAGG GATTTCGTGT CAGCGAACAA
TTGGCCGGCA TACCCACAGC TGTGATGGGC GAAGCAGGGG AGGGCGGTCC TATCATAGCG
TTTCTCGGCG AATATGATGC CCTGTCCGGG CTCAGCCAGG AAGCCGGCGT CGCTGAACAT
AAGCCGATTG CCGCAGGCGG CAACGGCCAT GGCTGCGGCC ACAACCTACT CGGCTCCGCG
GCTCTCCTGG CCGCCGCTTC CCTGAAAGAC TGGTTGAAAG AAAAGGACTT GCCTGGACGT
GTGCGCTATT ATGGTTGCCC AGCCGAAGAG GGTGGAGCCG CCAAGGCCTT CATGGTCAGG
GCAGGGGCCT TTGAAGGCGT CGATATCGCC ATCAGTTGGC ATCCAAACTC CTTCGCGGGC
GTGCAGCGCA CCACCTCGCT TGCCAATTCC CGTGTCGATT TCACTTTCAG GGGGAGGGCG
GCCCATGCCG GATCAAACCC CGATCTGGGG CGGAGCGCTC TCGATGCGGT GGAACTGATG
AGTGTCGGCG TCAATTATAT GCGCGAACAC ATGCCATCCG ATTGCCGCGT ACACGCCGCT
ATTCTCGATG CGGGTGGCAT TTCACCCAAT GTCGTCCAGG CCTATGCCAA GGTCCGCTAT
CTGATCCGCG CCCCTGAGCT ACAAGGCATG AAGACCCTCG TGGAACGGGT GAAGAAAATT
GGCGAGGGTG CGGCATTGAT GACCGAAACC CGACTGGAAA CACAGGTGAT CAGCGCCGTT
TCCAACGTGC TGACCAATGG TCCGCTAATG GCGGCCATGC AGGAGGCCTG GGAAGAACTC
GGCCCACCAC CCTTCGATGC GGCGGACCGG GCTTTCGCCG AAACAATCCG CGCCGTCTTG
ACGCCGGAAG AAAAGTCGGC ACCCTGGCGT TTTGAAGGCC TGCCGGAGCG CGATATCCCG
CTTGCCGATT TCATTCTGCC CGCCCATGAC CGCACGCCGC TGCTGACCGG GTCAACCGAT
GTCGGCGATG TCAGCTGGGT GGTGCCAACC GTGCAGGCCG ATGGGCCGAC CTGCGCCATC
GGCACACCGT TCCACACCTG GCAATTGGTG ACGCAGGGGA AAAGCCCTCT GGCTCACAAG
GGCATGGTGG CTGCGGCAAA GGTCATGGCC GCCACAGGCC GCGCCGCCTT CGAAAGCGAA
CAGTTACGCG AAGCGGCACG TGCTGATCTG GTCGCCCGTC GCAAGGGCCA ACCCTATCAA
AGTCCCTTGC CCGCCGACGC AGAACCGCCA ATCGTGGAAA TGGGTGGCCG TAAGTAA
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| Protein sequence | MTVSPNTSAA LWSIVDTKTP DFIALSDRIW GMPETCYMEE SSVAEHVAML KAEGFRVSEQ
LAGIPTAVMG EAGEGGPIIA FLGEYDALSG LSQEAGVAEH KPIAAGGNGH GCGHNLLGSA
ALLAAASLKD WLKEKDLPGR VRYYGCPAEE GGAAKAFMVR AGAFEGVDIA ISWHPNSFAG
VQRTTSLANS RVDFTFRGRA AHAGSNPDLG RSALDAVELM SVGVNYMREH MPSDCRVHAA
ILDAGGISPN VVQAYAKVRY LIRAPELQGM KTLVERVKKI GEGAALMTET RLETQVISAV
SNVLTNGPLM AAMQEAWEEL GPPPFDAADR AFAETIRAVL TPEEKSAPWR FEGLPERDIP
LADFILPAHD RTPLLTGSTD VGDVSWVVPT VQADGPTCAI GTPFHTWQLV TQGKSPLAHK
GMVAAAKVMA ATGRAAFESE QLREAARADL VARRKGQPYQ SPLPADAEPP IVEMGGRK
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