| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5012 |
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| Symbol | nocP1 |
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| ID | 7381178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 11880 |
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| End bp | 12659 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648692 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002546929 |
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| Protein GI | 222106138 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGATG GCAGCGGTTT CGCCCTTGAG GTGGAAGATA TCCACAAGAG CTTCGGCGCG
CACGCGGTTC TGAAGGGCTT GTCGGTGCGT GCTGCGAAAG GCGATGTCAT TTCGATCATC
GGGTCCTCGG GGTCTGGAAA AAGCACGTTC CTGCGCTGCA TCAACTTCCT GGAAATGCCG
GACCGAGGGC GCATCGTCGT CAATGGTGAA GAGGTTGCCA TCAAGCTGGG GCGGCGTGGT
GAGCCAAAGC CCGCCAGCTG GCGTCAGGTC GAGCGGTTGC GGACCGGACT TGGGATGGTG
TTTCAAAACT TCAATCTCTG GGCGCATCGG ACAGTTTTAG AGAATGTTAT CGAAGCGCCG
GTGCATGTGA TGGGCGTCAA GCGCGCGGAA GCTATCGAAC GTGCCGAGTC CTTGCTGCAT
AAGGTCGGTC TCTACGATAA GCGCGATGCT TATCCGGCTT TCCTCTCGGG CGGGCAGCAA
CAGCGTGCCG CCATTGCCCG CGCGCTCTGC GTGGAACCTG CCGTCATGTT GTTCGATGAG
CCTACGTCGG CGCTCGATCC GGAACTGGTT GGTGAAGTGC TGAAGGTCAT TCGTGATCTG
GCCGAGGAAG GCCGGACCAT GCTGCTCGTC ACTCATGAGA TGCGCTTTGC CCGCGACGTT
TCCAGCCATG TTCTGTTTCT ACACCAGGGG CGTGTCGAAG AGCAGGGACC GCCTGAACAG
GTCTTCGGCA ATCCGCTCAG CGACCGCTGT CGGGAATTTA CCGGCGGGAT CGGCGCCTGA
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| Protein sequence | MIDGSGFALE VEDIHKSFGA HAVLKGLSVR AAKGDVISII GSSGSGKSTF LRCINFLEMP
DRGRIVVNGE EVAIKLGRRG EPKPASWRQV ERLRTGLGMV FQNFNLWAHR TVLENVIEAP
VHVMGVKRAE AIERAESLLH KVGLYDKRDA YPAFLSGGQQ QRAAIARALC VEPAVMLFDE
PTSALDPELV GEVLKVIRDL AEEGRTMLLV THEMRFARDV SSHVLFLHQG RVEEQGPPEQ
VFGNPLSDRC REFTGGIGA
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