Gene Avi_9871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9871 
Symbol 
ID7380003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011986 
Strand- 
Start bp57784 
End bp58347 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content61% 
IMG OID643648293 
Producthypothetical protein 
Protein accessionYP_002546530 
Protein GI222102389 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCCT CTGAGATAAT GATCCTTGCG GCCGCGCTCG CGCTTTTTGC GGCCGCTCTG 
CTGTTGCGAC GGCTGCTCCG GCCGAAGGCC AAGGAGCGAC GTCACCGCCG CAAGCAGGAC 
CAGGCCCGCC GCGTTCTGGC AAAGATCAAC ACCATTCCGC TAATGCCGCA GCGCTTGGCT 
TACCTTCGCA AGATCGATCC CCTGACATTC GAGGAACTTT TGCTCGAGGC TTTTGAGCGG 
CGCGGCCATG TCGTTCGGCG CAACGCGTCC TATAGCGGTG ATGGCGGGCT GGATGGTTCG 
GTGGTTATCG AGGGAGAAAC GTACCTTTTA CAGGCAAAGC GATACGGCAA ACACATCAAC 
CGCGCTCATG TGGCGGCCTT CAGCGCTGTC CTCGCTGCAC GGGACTGCAG CGGGATCTTC 
ATCCATACCG GACGGACGGG CGCCGGCGCG AAGGATGTTG CAGCCGCGAA CCCGAACCTG 
ACGATCGTCA ACGGTCAGCG GTTGCTCGAT TTTCTCAACA CCGGCGACAT CGAACGATCG 
ACCGGCACGC ATAGCAGGAA CTGA
 
Protein sequence
MQPSEIMILA AALALFAAAL LLRRLLRPKA KERRHRRKQD QARRVLAKIN TIPLMPQRLA 
YLRKIDPLTF EELLLEAFER RGHVVRRNAS YSGDGGLDGS VVIEGETYLL QAKRYGKHIN 
RAHVAAFSAV LAARDCSGIF IHTGRTGAGA KDVAAANPNL TIVNGQRLLD FLNTGDIERS 
TGTHSRN