Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9813 |
Symbol | avhB9 |
ID | 7379956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011986 |
Strand | - |
Start bp | 14727 |
End bp | 15536 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643648245 |
Product | type IV secretion protein AvhB9 |
Protein accession | YP_002546482 |
Protein GI | 222102341 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTCA GACTACTTTT TTCAGCGGCC TTCATGGCCG CAACGATGAC TCACGCCTTC GGCGCACAGC AGCCTCGTCC GGGCACTTTG GATTCACGCG TCACAAGCGT CGTTTACCAG CCAAACAACG TGGTGAAGGT CTCAGCGACT TACGGCATCT CAACGATGAT CATCTTCGAT GAAGATGAAA AGTTCGAGAC GATCTCTCTT GGCGACACCG ACAGCTGGCA GGTCGCACCG TCTGAAAAAG GGAACATCCT TTTCGTAAAA CCTATTGCGA AGGGTGTTTC TACGAACATG AATGTCGTGA CATCCAAGCG GATCTATTTC CTCGAATTAA ATGACTACGC GCCGACAGAC GAACGTAAGG TCTTCGGAAT CCGGTTTGTG TACCCCGAGA AGGACTTGAA CGCATCTCTG CGGAAAGAGG CGGAGTTTAG AGCCGCGAAT CCGAACGTAA GCAATATCGA CAAGGCCAAT GTAAATATCG ACTATTCATT TTCGGGTGAT GCCGCTTTGA AGCCGTCTAT GGTCTTCGAT GACGGGAAAA AGACGTTCTT TAAGTTCAAA GGGCGCGTAC CAGCGATCTT TGCGGTTCAG TCCGACTTCT CTGAGACCCT TCGGAATTTC AGAAAAGAGG GCGAATACAT CGTCGTTGAT GGCACGGCGA CGCAATACAC GCTGCGAGAC GGGAACCAAT GGACCTGCAT TTTCAATCTA CGCAAGCCCG ATTTTGCAGC CCCTGACCCT GACATCATGG CTCCAAAACC TGATCCGGAC GCAAGCAAGC GCAGAAGGAG CGGCAACTAA
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Protein sequence | MRVRLLFSAA FMAATMTHAF GAQQPRPGTL DSRVTSVVYQ PNNVVKVSAT YGISTMIIFD EDEKFETISL GDTDSWQVAP SEKGNILFVK PIAKGVSTNM NVVTSKRIYF LELNDYAPTD ERKVFGIRFV YPEKDLNASL RKEAEFRAAN PNVSNIDKAN VNIDYSFSGD AALKPSMVFD DGKKTFFKFK GRVPAIFAVQ SDFSETLRNF RKEGEYIVVD GTATQYTLRD GNQWTCIFNL RKPDFAAPDP DIMAPKPDPD ASKRRRSGN
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