| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9241 |
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| Symbol | |
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| ID | 7367845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 190255 |
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| End bp | 191073 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643644408 |
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| Product | ABC transporter substrate binding protein (amino acid) |
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| Protein accession | YP_002542705 |
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| Protein GI | 222083302 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.431344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCC TAACATTAGC TACCACATCA GCACTCGCGC TCATTGTGGG CTTTGGCCCC
GCCCTAGCTG ACCGCCTCGA CGACATAAAA ACCAAGGGAC TTTTGGTTTG CGGGACGGTC
CCGAATTATG AGCCGTTCTC GTTTCCCGAT CCGAGCACCC GTCAGCTGGT TGGCTATGAT
GTCGATTTCT GTGAAGCGAT TGCCGGAAAG CTTGGCGTCA AATTCGAGAT GAAGACGATG
TCGAATGACG CACGTATCCC CGAGCTGACG GAAGGGCGCG TTGATATTCT CACGGCCGAC
TTGGGCTACA CTCTAACCCG TGCCGAACAG ATCAATTACT CCTACGGCTA TTTCATGGTA
CCGCATCGGG TGGCAGTTCG GGCCGATCGC GGCTTTGCTG ATCTCAAGTC TCTCGCGGGC
AAGCGCATTG CCGTCATCAA GGGATCAACA TCTGAAGGTT TCGTGCGCAA ATCCGTCGAA
AACGTCAATG TGGTGACCTT TGACGATGCG CCGACCGGAT TCCTTGCTCT CGTTCAGGGT
AAGGTGGATG GCTTTAGCGC CTCATTCCTG GTGAACGCTC GACTTATCTC TAAGGCAGGC
GATGCGGCTC CACTCAAGTT GGTTGATCAG GCGGTAGGTA CCGAGACCTG GGGCATCGGC
GTGCGGAAGG GCGAGGATCG CCTGCTCGGG GCCGTCGACA AAGCCCTAGT CGATCTGGAT
AATTCCGGCG AGGCCGAGAA CATCCACGAC AAATGGCTCG GCGAGGGAAC GATCTACAAG
CAGAAGAAGA GCTTTAAGAT CGAGAAGATC GCGAACTAA
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| Protein sequence | MKILTLATTS ALALIVGFGP ALADRLDDIK TKGLLVCGTV PNYEPFSFPD PSTRQLVGYD
VDFCEAIAGK LGVKFEMKTM SNDARIPELT EGRVDILTAD LGYTLTRAEQ INYSYGYFMV
PHRVAVRADR GFADLKSLAG KRIAVIKGST SEGFVRKSVE NVNVVTFDDA PTGFLALVQG
KVDGFSASFL VNARLISKAG DAAPLKLVDQ AVGTETWGIG VRKGEDRLLG AVDKALVDLD
NSGEAENIHD KWLGEGTIYK QKKSFKIEKI AN
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