Gene Avi_9231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9231 
Symbol 
ID7367838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011984 
Strand- 
Start bp183824 
End bp184567 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content63% 
IMG OID643644403 
ProducttetR-family regulatory protein 
Protein accessionYP_002542700 
Protein GI222083297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.484933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACT TGCCCAAACC AGCAGCAAAC GGCGGTGCGG TCCTGTGGGA GAGGCCTGAG 
CCGAAAGGCC CGCTCGCTCC GCTGAACCGC GAAATCATCA CGAACGGCGC CATTGCCATC 
GCCGACAGGC AAGGACTGGC ATCCGTCTCG TTGCGAAAGG TTGCCGCCTC TCTCGATGCG 
ACCACCATGC GTCTTTACAG CTACCTCTCC ACCAAGGAGG AGTTGCTGGA GCTGATGGTG 
GACGCCGTCT ATGGAGAGAT GCTGGCCGCC GGCCCACTGG GCAGCGGCTG GCGCGAGGCT 
CTTCGCACCG TCGGTGATCG CCTGCGTCAG GCCACGCGGC AGCACCCATG GTTCATCGAA 
CTCCTCGGAG GCAGGCCGAA CCTTGGCCCC AACGCCATTA CGCATCTCGA AGCAGTATAT 
GCGGCGCTGA GCGATGCGCA CGCGTTCAAG GACATGGACG CCATCATGCA GGCGGTGAAC 
ACCGTCGCCG CCTACGTGAT CGGCGCTTTG CGCAACGAAG CGAACGAGCT TCGCGCCGAG 
CGCGAAAGCG GCATGGGTCC GACGGAGTGG CAGGTGGCTT GGTGGCCCTA TCTTAAACGG 
CTGATCTCCA CCGGTCGGTT TCCGATGATG GCAAGGGTCG TCAGCGAGGC CACACATCCG 
GGGGCCGAGA TCGAGTTCGA CCGAGGGCTC GACTGTGTTC TCGCCGGGAT CGAACTTATC 
TTGCTGATGG AGCGCCGCAG TTAG
 
Protein sequence
MKNLPKPAAN GGAVLWERPE PKGPLAPLNR EIITNGAIAI ADRQGLASVS LRKVAASLDA 
TTMRLYSYLS TKEELLELMV DAVYGEMLAA GPLGSGWREA LRTVGDRLRQ ATRQHPWFIE 
LLGGRPNLGP NAITHLEAVY AALSDAHAFK DMDAIMQAVN TVAAYVIGAL RNEANELRAE 
RESGMGPTEW QVAWWPYLKR LISTGRFPMM ARVVSEATHP GAEIEFDRGL DCVLAGIELI 
LLMERRS