| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9195 |
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| Symbol | traR |
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| ID | 7367733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 151773 |
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| End bp | 152477 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643644378 |
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| Product | transcriptional regulator TraR |
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| Protein accession | YP_002542675 |
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| Protein GI | 222083272 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.391185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCACT GGCTGGACAG GCTGACCGAT CTTGCGGCCA TACAAGGCGA CGAAAGCATC
CTAACGCAGG GCCTTGCCGA CCTCACCCAA CATTTCGGCT TCACCGGCTA CGCCTATCTC
CACATCCAGC ACAAGCATAC CATTGCAGTT ACCAATTATC ATCGCGAGTG GCGATCGACG
TATTTCGACA AGCACTTCGA TAAGCTCGAT CCAGTCGTCA AACGCGCGAA ATCCAGAAAG
CAAGTTTTTG CGTGGTCCGG CGAACAGGAT CGCGCGAGGC AATCGAAGGA AGAGCGTGCC
TTCTATGCGC ATGCTGCCGA TTTCGGTATC CGCTCCGGGG TCACCGTTCC AATCAAGACC
GCCAACGGCT CTATGTCGAT GTTCACTTTA GCTTCCGAGA AGCCAGCGAT CGATCTCGAC
CGTGAGATAG ACGCGGTCGC AGCGGCTGCT GCCGTCGGAC AACTCCATGC CCGCATCTCG
TTCCTTCAAA CAACTCCGAC CGTGGAAGAT GCGGCCTGGC TCGATCCTAA AGAGGCGACC
TATCTCAGAT GGATCGCTGT CGGAATGACG ATGGAGGAAA TCGCTGACGT GGAGGGCATC
AAATACAATA GCGTCCGTGT TAAGCTCCGC GAGGCTATGA AGCGCTTCGA CGTCCGGAGC
AAGGCCCATC TTACCGCGCT CGCAATTCGT AGAAAGCTGA TCTGA
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| Protein sequence | MQHWLDRLTD LAAIQGDESI LTQGLADLTQ HFGFTGYAYL HIQHKHTIAV TNYHREWRST
YFDKHFDKLD PVVKRAKSRK QVFAWSGEQD RARQSKEERA FYAHAADFGI RSGVTVPIKT
ANGSMSMFTL ASEKPAIDLD REIDAVAAAA AVGQLHARIS FLQTTPTVED AAWLDPKEAT
YLRWIAVGMT MEEIADVEGI KYNSVRVKLR EAMKRFDVRS KAHLTALAIR RKLI
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