| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9134 |
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| Symbol | tnp |
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| ID | 7367687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 101338 |
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| End bp | 102495 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643644334 |
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| Product | transposase |
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| Protein accession | YP_002542631 |
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| Protein GI | 222083228 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.220032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTGA TGATCGAGGG ACAGTCGCAC CTCCAGCCTT TCGGCTTACC TTATTGGGGT
TTCGAAAATC TCAATAAAGG AGTTGGAAGC ATGACTGCCT CTTATGATTA CCATATCGGC
GTCGACTATC ACAAATCCTA CAGCCACCTG GTGGTGCAGG ACAGTAGCGG TAAGACGCTA
CGCTCCGGCC GTGTTAAGAA CGACCGCCAG TCGCTCGGTG GGTTTCTGGA ACGATACCGT
GAGAACTCGC ACGCGGTTGT CGAGGCGACG CGCAACTGGA TGGTGATGTA CGACTGGCTC
GATGACATTT GTGATGATGT CGTTCTCGCC CATCCGTTGA AGGTCAAGGC GATCGCCGAC
GCCAAGATCA AGACCGACAA GATCGACGCG ACTGTGCTGA CGCATCTGCT TAGAGCCGAC
CTGGTGCCGG AGGCCTGGGC GCCCGGCGAA CGGGCCCGAG AACTGCGTGT CGCGCTACGT
GAGCGGATGT TTTACTTGCG GCTGCGCACG ATGACGAAGA ACCGCATCGT CACGGTGTTC
GACCGCTATC CGGAGCAGAC GGCGCAGTTG AAGAAGCTGG GCGACCTGTT CGGCAAGGCC
GGCCGCGCTC AGCTCGCGCA GGTCAAGGTC TCAGAGATCG ACCGCATCCA GATCGACCGT
GGCCTCGCTT TCATCGGGGA CATCGATGGG CGGATCAAGC AATCGGAAGC AACGATCCGG
GCGATGACGA AAGCGAACAC CAATGTGAAG CTGCTCAAGA CGATCCCCGG CATCGGCGAG
TTCTTCGCCC GGCTGATCGA TGCGGAGATC GACGACATCA AGCGGTTTCG CAACGCCAAG
AAGCTCGCCG CCTATGCCGG ACTGGTGCCG TCCACCTATT CCTCCGGCGG CAAGACCTTC
CACGGCAAGA TCATCAGGCA GGGCAACAAG TGGCTGCGCT GGGCCTTCGT CGAGGCGGTG
GCACCTGCTC TTGCTAGCGA TCCGCAGCTT CGCGCCCAAT ACGAACACTT GAAATCCAGA
GGAGTGAACA AAGCGCGGGT TGCCATCGCG CGCAAGCTTT TGACGATCGC CTTCCAGATC
CTGCGTGACC AACGCCCATA TGAACGGCGC GGCGGCAGAA GCGAGGATTG CGCGTCGACG
ATATCCCGGC TGTCCTGA
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| Protein sequence | MQVMIEGQSH LQPFGLPYWG FENLNKGVGS MTASYDYHIG VDYHKSYSHL VVQDSSGKTL
RSGRVKNDRQ SLGGFLERYR ENSHAVVEAT RNWMVMYDWL DDICDDVVLA HPLKVKAIAD
AKIKTDKIDA TVLTHLLRAD LVPEAWAPGE RARELRVALR ERMFYLRLRT MTKNRIVTVF
DRYPEQTAQL KKLGDLFGKA GRAQLAQVKV SEIDRIQIDR GLAFIGDIDG RIKQSEATIR
AMTKANTNVK LLKTIPGIGE FFARLIDAEI DDIKRFRNAK KLAAYAGLVP STYSSGGKTF
HGKIIRQGNK WLRWAFVEAV APALASDPQL RAQYEHLKSR GVNKARVAIA RKLLTIAFQI
LRDQRPYERR GGRSEDCAST ISRLS
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