| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9127 |
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| Symbol | |
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| ID | 7367681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 92339 |
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| End bp | 93454 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643644328 |
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| Product | sugar ABC transporter (sugar-binding protein) |
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| Protein accession | YP_002542625 |
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| Protein GI | 222083222 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.392658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCA AGTCACGCAT TGGCGTTCTT GCTGCTCTTC TCTGTGCAAG CGCGATCACA
CCGGTCGCAG CGCAGGACAA AGCTGTTCCC GATGGCGTCA TGTCGCACAA GTTCGCTTGG
GGCGACTTTA AGCTCGCACC CCGCATCGCC GACAAGCTGA AGACCGGAAA GCCGGTCAAC
ATCGTCATTC AAGTTGCCGG AACAGGCGTG CCGATTTCCG GCGCCCAGTT CAAGTTTGGT
ACCGTCAAGG GTTGCGAAGA TGCCAAGGCG GCCGGCCTCA ACGCAAACTG CCGCCTGGTC
GGCCCGGTCA ACCCGGATCC GGCACAGCAG ATCAACGAAC TTGAGACGCT ACTCAACTCT
GATCAGGTCG ATTGCCTTGG CGTCCAGGCA CCGCTACCCA ATCAGTTCAA CGCCATCATC
AACCGTTACG TCGACGCCGG CGTTCCGGCG ATGACGCTGA ACAACGATGC TGCCAAGTCC
AAGCGCTTCT CATTCTCGGC GCTGAACGAA GTTGCTGCCG GACGTTTCAA CGGCGAAGCG
ACGGCAAAGC TGGTCAGGGA AATGCGGCTA ACCATAACCG AGGTGGCCCT CGGTAGCGGC
GGCCCGGATG AGCCCTGGGC CCAGGGCCGC ATGCAGGGCT TTCAGGAAGG CTTCAAGGCC
TCCTATCCAG ATGTGAAGTT CTTCAACGAC TACAAGACCG GCCTGCCGAC GAGCCGGAAC
TACACCACGG CGGAAGTCAT CGACAGCGTG ACGCCGTTCC TGACGGGCAA CCCGAAGGTC
AATCTGTTTT TCCATACCGA CCAGGGTGTC GAGGGCGTTG CGCGCGTCAT CAACAATCTG
GGCCTGACCG GCAAATCCTT TACTTCGGGC TTCAACGTCA GCGGCGCAAT TCTGGACGAT
ATCGAAGCGG GCCGGACGCT CGTCACCATC GATCAGGGCT TCGACAATCA GTCCGAAGCT
GCAGTAAAGC AATGCGTGGC CTACCTGACC AAGGGCGACG TTCACGCTGA TCCCCTTCAA
TACCTGAACC CGATCGTCAT CACGAAGGCT GGCGGAGATG GGATGATCAC GGTCGAGGCC
GCCAAGGCCC GCCTGAAGGC TGCGCTCGGA AAGTAA
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| Protein sequence | METKSRIGVL AALLCASAIT PVAAQDKAVP DGVMSHKFAW GDFKLAPRIA DKLKTGKPVN
IVIQVAGTGV PISGAQFKFG TVKGCEDAKA AGLNANCRLV GPVNPDPAQQ INELETLLNS
DQVDCLGVQA PLPNQFNAII NRYVDAGVPA MTLNNDAAKS KRFSFSALNE VAAGRFNGEA
TAKLVREMRL TITEVALGSG GPDEPWAQGR MQGFQEGFKA SYPDVKFFND YKTGLPTSRN
YTTAEVIDSV TPFLTGNPKV NLFFHTDQGV EGVARVINNL GLTGKSFTSG FNVSGAILDD
IEAGRTLVTI DQGFDNQSEA AVKQCVAYLT KGDVHADPLQ YLNPIVITKA GGDGMITVEA
AKARLKAALG K
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