| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9120 |
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| Symbol | |
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| ID | 7367674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 84388 |
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| End bp | 85476 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643644321 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_002542618 |
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| Protein GI | 222083215 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGAAT ACAAGATTGC AGCCATCCCC GCCGATGGCA TCGGACCCGA AGTCATCGCT
GCCGGCCTGC AGGTGCTGGA AGCTCTGGAG AAGCGTAGCG GCGACTTTAA AATTCACACC
GAAACCTTCG ACTGGGGTTC TGATTACTAC AAGAAGCATG GCGTGATGAT GCCATCCGAC
GGACTTGAAA CGCTGAAGCC CTTTGACGCG ATCTATTTCG GTGCCGTCGG CGCACCGGAC
GTGCCGGATC ACATCACACT CTGGGGTCTT CGTCTTCCGA TCTGCCAGGG TTTCGACCAG
TACGCGAACG TCCGTCCGAC GAAAATCCTG CCTGGCATCA CGCCGCCGTT GCGCAACTGC
GGCCCGGGCG ATCTCGACTG GATCATCGTT CGTGAGAACT CCGAAGGTGA ATATTCCGGC
CACGGCGGCC GCGCCCACAA GGGACTTCCG GAAGAAGTCG GAACGGAAGT TGCGATCTTC
ACCCGTGTCG GTGTCACCCG TATCATGCGC TACGCCTTCA AGCTCGCGCA GTCTCGCCCG
CGCAAGCTGC TAACGGTCGT GACCAAGTCC AACGCCCAGC GCCACGGCAT GGTCATGTGG
GACGAGATCG CGGCCGAAGT TTCGAAAGAG TTTCCTGACG TCACCTGGGA CAAGATGCTC
GTCGATGCCA TGACAGTGCG CATGACGCTC AAGCCCGAGA GCCTCGACAC GATCGTCGCC
ACCAACCTGC ATGCCGACAT CCTGTCTGAC CTCGCCGGTG CATTGGCAGG GTCTCTGGGC
GTCGCTCCCA CAGGCAACAT TGATCCCGAG CGTCGCTTCC CTTCGATGTT CGAACCGATC
CACGGTTCGG CGTTCGATAT CACCGGCAAG GGTATCGCAA ACCCGATCGC CACTTTCTGG
ACTGCGGCAC AGATGCTGGA ACATCTGGGC GAGCGCGATG CGGCTGCACG GCTGATGGCA
GCCGTGGAGC GGGTTACCGA GGCGGGCATT CTGACACCCG ACGTTGGCGG CAAGGCAACG
ACCCAGCAAG TTACGGATGC CGTCTGCGAG GCGATCGCCG GCTCGAACAT CCTCGTGGCT
GCCGAATGA
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| Protein sequence | MREYKIAAIP ADGIGPEVIA AGLQVLEALE KRSGDFKIHT ETFDWGSDYY KKHGVMMPSD
GLETLKPFDA IYFGAVGAPD VPDHITLWGL RLPICQGFDQ YANVRPTKIL PGITPPLRNC
GPGDLDWIIV RENSEGEYSG HGGRAHKGLP EEVGTEVAIF TRVGVTRIMR YAFKLAQSRP
RKLLTVVTKS NAQRHGMVMW DEIAAEVSKE FPDVTWDKML VDAMTVRMTL KPESLDTIVA
TNLHADILSD LAGALAGSLG VAPTGNIDPE RRFPSMFEPI HGSAFDITGK GIANPIATFW
TAAQMLEHLG ERDAAARLMA AVERVTEAGI LTPDVGGKAT TQQVTDAVCE AIAGSNILVA
AE
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