Gene Avi_9057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9057 
Symbol 
ID7367791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011984 
Strand- 
Start bp39913 
End bp40578 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content57% 
IMG OID643644285 
Producthypothetical protein 
Protein accessionYP_002542582 
Protein GI222083179 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.19539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGATCA TTGCCACCGC GGCTTGGTCT ATCCCGAAAA AGGTGGCCGA CCGGTTTGCG 
CAGGGAGGAA GCAGCCTCAC CCGATATGCA TCGGTCTTCG ACGGCGTCGA GGTCAATTCG 
ACCTTCTACC GCCGGCACAA GACGTCGACA TTCGCAACGT GGGAACACTC CGTACCCGAC 
GCATTCCGGT TCGCAGTCAA AATTCCTAAG GAGATTACCC ACACTAGCGC GATGAGAGAC 
ATCGCCGAGC CGTTCGACAC TTTCCTCGAA GACATCGCGC CTCTTGGAGA GAAGCGTGGA 
CCACTGCTCT GTCAGCTGCC GCCATCGCTG ACCTTCGATG TTGAGGTGCT CCAAACAGCG 
TTCAAGACGA TGCGGGATGC CGATGATGGG CCGATCGTCA TCGAGGTACG GCACAAGAGC 
TGGGCATCGG CCGAAGCGCT GGATCTGCTG AAGACCTATA GGATCGACCG GGTTCTGGCC 
GATCCTGCGC CGGTATGGCC GGTGGAAGAT TTCGACACGC CGCCGAAATA CGTCCGTCTT 
CATGGCAAAC CAAAAATCTA CTACTCGAGC TACACTGATA AGGAGATCAG ATCGTTCTCG 
AAACTGCTGG CAGCGCCACA GCTGGTGCGT GTTCGACAAT ACCGCATCAG GGGCCGCGAT 
CGATAA
 
Protein sequence
MPIIATAAWS IPKKVADRFA QGGSSLTRYA SVFDGVEVNS TFYRRHKTST FATWEHSVPD 
AFRFAVKIPK EITHTSAMRD IAEPFDTFLE DIAPLGEKRG PLLCQLPPSL TFDVEVLQTA 
FKTMRDADDG PIVIEVRHKS WASAEALDLL KTYRIDRVLA DPAPVWPVED FDTPPKYVRL 
HGKPKIYYSS YTDKEIRSFS KLLAAPQLVR VRQYRIRGRD R