| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9041 |
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| Symbol | cvgS |
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| ID | 7367779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 26163 |
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| End bp | 28268 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643644273 |
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| Product | two component sensor kinase/response regulator hybrid |
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| Protein accession | YP_002542570 |
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| Protein GI | 222083167 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAAAC TGAATGCTCA AGCTCCTTCT AACGGACGGC GTGGGGACCT GGCCCGGTCG
ATCGACACGA TCGACTGGAG TTTCACGGGG TTAGGGCCGC GCGCGGCGTG GCCTACGGTG
CTTGAGCAGA CGCTGAGTCT GGTCCTCAGT GCCGGCGTTC CGATGGCAAT TCTCTGGGGT
GAGGACGGCT GGGTCCTCCA TAACAGTGCC TACGCCGATT TCGCGGGTCA GCGGCACTCC
GCGTTTCCCG GCCGGCCGAT TTCAGAGGCC TGGCCCGAAC TGGCAGCGCT CAACAGCAGG
GTCGTCAAGG TCGTGTTGGG CGGACGAACT CTCTCTTTTC GCGACCGTCA TGCCGTCATT
GAACGGGGCG CAGGCCCAGA AGATGTCTGG CTCAATCTCG ACTTCAGCCC CCTCCTCGAT
GCGAATGGGA TACCGGCCGG CGTTCTGGTG ATCTTGAAAG ATACGACGGA GAGGGTTCGT
GTCGAGCAGC GGCTGGAGAT CGCCCAACAG GCCGGCGGTG TTGGCACATT CGAATGGTTT
CCGGCAAGCG GCGAACTCCA TGTCTCGCAG GAATACCGGA AAGTCTGGGG TCTAGACCCC
GATATCCGCA TCACGGATGA TCTTCTTATC AGCTTGCTTC ACCCAGATGA CCGCGCGGTT
TCCGGCCCTG CGCGACTGGG ACAAAGCAAC CCGCTCGAAT ATGCCGAGTA CCGCCGTATC
GATCCGAAGA CGGGGGACAC CCGTTGGATC GCACGGCGAG GCCAGGTGAT ATCCAGTGAA
CGCAGCGGCC GGAGACGCTT CGTCGGAATC GCTTTCGACA TCACCGACCG CAAGCAGGCG
GAAGTCACGC TGCAAAAGAG CGAAGAGCGC TGGCGCGGGC TGTTCGAGCA GATGCATGAA
GGCTTCTTCA CCGCCGAGGT GGTGCGGGAC GCCGAAGGTA GGGTCATAGA CTTTGTCTTT
ATCGACATCA ACCCGGCATT CGAGCGACAG ACGGGGCTGA TTGCCGCCCA GACGATCGGA
CAGCCGGTGC GCGAAGCGAT ACCAGGCGTT CAGGACGAAT TGATCGCCAC GTATGGAGAG
ATCGTCGACA CCGGACAGGC CAGGCAGTTC GAGGTCTACA TCCCGGCACT GGGAAACCGC
TGGTATGAGG CGCATGCCCG CAAGGTAGGG CCTGAACGTT TCGCCGCCCT TTTTCTTGAC
ATCACCATCC GCAAAGCTGC TGAGAAACGT GTTTTTGAAA GCGAGGAACG GTTCAGGACG
CTTTCGCAAT CGATGCCGAA CCACGTCTGG ACGGCGCGTT CCGATGGATC GCTCGACTGG
TTCAATGATC AGGTGTTTGC CTATAGCGGC ATGAGCGCGG AGCAATTGAC TGGCAACGGG
TGGGCCGCGA TGGTGCATCC CGATGATATC GATATCGCCG CGCAGGAATG GACAGAAGCT
CGTGCCGCTG CCAGGCAATA TCAGGTGGAA TTCCGTCTGC GCCGCCATGA TGGCGCCTAT
CGATGGCATA TTGCACGCGC CGTCCCGATC AAGCCCGAGG GGGGCGGTGT CGCTCACTGG
ATCGGCACCA ATACCGACAT TCATGACCAG AAGGAAGCAG AAGCAGCCCT CGAAATCAGC
GCCGCTAAGC TCGAGGCTCG GGTCGAAGAG CGAACAGCCC AGCTACTCGA AATGCAAAAC
GCCTTGCAGC AATCCCAAAA GATGGAGACG ATCGGCAAGC TGACCGGCGG CGTTGCGCAC
GACTTCAACA ATCTTCTCCA GGTCATTTCG GGGAATCTCA ATCTTCTGGC CAAGGACGTG
GCCGGAAACG AGCGCGCCGA GCGGCGTGTC ACTAATGCTC TTGCCGGTGT GATCAGAGGA
GGCAAGCTGG CAAGCCAGCT TCTGGCATTT GGGCGACGAC AGCCTCTCGC GCCGAAAGTC
GTTCATCTCG GCCGGTTGTT AACGAACATG GATGATCTCT TGCGTCGCTC TATCGGCGAA
GCGATCGAGA TCGAGACGAT CGTCTCAGGC GGCCTGTGGA ACACGTCGAT TGATCCGACG
CAGATGGAGA ACGCTGTTCT CAACTTGGCC ATCAATGCTC GCGACGCGAT GGATGGGGCA
TCGTAA
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| Protein sequence | MPKLNAQAPS NGRRGDLARS IDTIDWSFTG LGPRAAWPTV LEQTLSLVLS AGVPMAILWG
EDGWVLHNSA YADFAGQRHS AFPGRPISEA WPELAALNSR VVKVVLGGRT LSFRDRHAVI
ERGAGPEDVW LNLDFSPLLD ANGIPAGVLV ILKDTTERVR VEQRLEIAQQ AGGVGTFEWF
PASGELHVSQ EYRKVWGLDP DIRITDDLLI SLLHPDDRAV SGPARLGQSN PLEYAEYRRI
DPKTGDTRWI ARRGQVISSE RSGRRRFVGI AFDITDRKQA EVTLQKSEER WRGLFEQMHE
GFFTAEVVRD AEGRVIDFVF IDINPAFERQ TGLIAAQTIG QPVREAIPGV QDELIATYGE
IVDTGQARQF EVYIPALGNR WYEAHARKVG PERFAALFLD ITIRKAAEKR VFESEERFRT
LSQSMPNHVW TARSDGSLDW FNDQVFAYSG MSAEQLTGNG WAAMVHPDDI DIAAQEWTEA
RAAARQYQVE FRLRRHDGAY RWHIARAVPI KPEGGGVAHW IGTNTDIHDQ KEAEAALEIS
AAKLEARVEE RTAQLLEMQN ALQQSQKMET IGKLTGGVAH DFNNLLQVIS GNLNLLAKDV
AGNERAERRV TNALAGVIRG GKLASQLLAF GRRQPLAPKV VHLGRLLTNM DDLLRRSIGE
AIEIETIVSG GLWNTSIDPT QMENAVLNLA INARDAMDGA S
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