| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9026 |
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| Symbol | |
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| ID | 7367770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 17042 |
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| End bp | 17995 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643644265 |
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| Product | sensory transduction histidine kinase |
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| Protein accession | YP_002542562 |
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| Protein GI | 222083159 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.157622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGC CCGAAGACAA GAACCTTTCC CCAGAAGGTA TAGCTAGCCT ACGCCAACTT
GCCGAAGCCC TGGATGACCA CCGGTTTCGA CAGTTTCTCG ATCATGTGCC GTTCGCCGTC
GCTGTATCCG AGCTTGGAGA AAGCGAGGCG CTGATCTATG TCAATCTGGA GTTTGAGCGG
CTGACGTCGC TGACCGCGAA CCAGGTTCAG GGAAAATCCT GGTCGAATGT CGATCTCAAT
GCCGGCGCAG TCGCAGGCGA AGGATCGCTG ACATCCGCGG TGACGTCCGG AGAAGAGTAT
ATCGGGGCGT TCTTTTTGGC CGGCGGGCCG GGCGAGAGCC TGACGATCGA TGTATGGTCG
AACACGATCG TCGACGATGA CGGTGCTCCA CTTTTTCGCC TGGTCGCCTT TGCTGCTCGC
AACCAGGCCT CATCGGATCA AAGTGTCAGT GAGATGCTGG CGGAAAAAGA CGTTCTTCTG
CGCGAACTGC AGCACCGGGT CAAAAACAAT TTTCAGATGA TCACTGCACT GATCAGGATG
GAGGCGCGCA ACGTTCAGCA CAGCGAAGCA AGTGAGCGGT TTGCGCAGCT TGCAGGGCGG
ATCGAGGCAC TCGCCCTGCT TTATCGCTCG CTGTCGGACG AGGAAAAATG CGGGACGATC
GACCTTGGCT CCTACGTCAA CCAGATCGCT GCCTCGGTGA TGACCGCGCA CGCCGTGGAA
GGGATCAGGC TGGACATGAA GGTCGACACC TGGCCCGCGT CGGTCAATGT CGCGATGCCT
GCGGGCCTCG TCGTCAACGA GCTTTTGACC AACGCGCTGA AGCACGCTTT CATCGGCCAA
GATGGGGAGA AATTACCCTG CGCTGCGTCG TCGATGACAC CGGCTGCCGT ATCACAGTTG
CCGATAACGG CGCGGGCCTT CTTCAGGCCA CTTGGCCGAA ACGCGGGAAA TTGA
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| Protein sequence | MSEPEDKNLS PEGIASLRQL AEALDDHRFR QFLDHVPFAV AVSELGESEA LIYVNLEFER
LTSLTANQVQ GKSWSNVDLN AGAVAGEGSL TSAVTSGEEY IGAFFLAGGP GESLTIDVWS
NTIVDDDGAP LFRLVAFAAR NQASSDQSVS EMLAEKDVLL RELQHRVKNN FQMITALIRM
EARNVQHSEA SERFAQLAGR IEALALLYRS LSDEEKCGTI DLGSYVNQIA ASVMTAHAVE
GIRLDMKVDT WPASVNVAMP AGLVVNELLT NALKHAFIGQ DGEKLPCAAS SMTPAAVSQL
PITARAFFRP LGRNAGN
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